RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 TBX21Q9UL17 535 aa13.61□□□□□ -0.23
USP8-209ENST00000560297 ODF2LQ9ULJ1 636 aa13.61□□□□□ -0.23
USP8-209ENST00000560297 AKT3Q9Y243 479 aa13.61□□□□□ -0.23
USP8-209ENST00000560297 NR2E3Q9Y5X4 410 aa13.61□□□□□ -0.23
USP8-209ENST00000560297 ACTN4O43707 911 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 KRT18P05783 430 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 MYL1P05976 194 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 CKBP12277 381 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 ARL2P36404 184 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 THPOP40225 353 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 CLCN3P51790 818 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 POU5F1BQ06416 359 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 SNW1Q13573 536 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 TRIM71Q2Q1W2 868 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 FAM102BQ5T8I3 360 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 KRBA2Q6ZNG9 492 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 PRPF31Q8WWY3 499 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 DHX38Q92620 1227 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 DDX12PQ92771 950 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 TMEM143Q96AN5 459 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 NOC4LQ9BVI4 516 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 RUSC1Q9BVN2 902 aa13.6□□□□□ -0.23
USP8-209ENST00000560297 HOOK1Q9UJC3 728 aaKnown RBP13.6□□□□□ -0.23
USP8-209ENST00000560297 MYMKA6NI61 221 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 KINO60870 393 aaKnown RBP13.59□□□□□ -0.23
USP8-209ENST00000560297 HIP1RO75146 1068 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 NR1I2O75469 434 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 TIMP1P01033 207 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 RAG1P15918 1043 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 SELPP16109 830 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 LIG1P18858 919 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 MCM4P33991 863 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
USP8-209ENST00000560297 GIT2Q14161 759 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 TFDP1Q14186 410 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 PPP2R5AQ15172 486 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 CNNM4Q6P4Q7 775 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 ZNF410Q86VK4 478 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 ELOA2Q8IYF1 753 aaPredicted RBP13.59□□□□□ -0.23
USP8-209ENST00000560297 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 WNT8BQ93098 351 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 IFT74Q96LB3 600 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 C7orf25Q9BPX7 421 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 CELF4Q9BZC1 486 aaKnown RBP13.59□□□□□ -0.23
USP8-209ENST00000560297 POLR3FQ9H1D9 316 aaPredicted RBP13.59□□□□□ -0.23
USP8-209ENST00000560297 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
USP8-209ENST00000560297 COL4A3BPQ9Y5P4 624 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 SQORQ9Y6N5 450 aa13.59□□□□□ -0.23
USP8-209ENST00000560297 TRIM43BA6NCK2 446 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 RSPH10B2B2RC85 870 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 VTNP04004 478 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 RSPH10BP0C881 870 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 PTMSP20962 102 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 AFMP43652 599 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 CRYBB1P53674 252 aaPredicted RBP13.58□□□□□ -0.24
USP8-209ENST00000560297 NLRP11P59045 1033 aaKnown RBP13.58□□□□□ -0.24
USP8-209ENST00000560297 LAMTOR4Q0VGL1 99 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 DRP2Q13474 957 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 ZNF618Q5T7W0 954 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 FAM43BQ6ZT52 329 aaPredicted RBP13.58□□□□□ -0.24
USP8-209ENST00000560297 SH3RF1Q7Z6J0 888 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 RHPN2Q8IUC4 686 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 TRIM43Q96BQ3 446 aaPredicted RBP13.58□□□□□ -0.24
USP8-209ENST00000560297 REEP2Q9BRK0 252 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 TRIM9Q9C026 710 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 INO80BQ9C086 356 aaPredicted RBP13.58□□□□□ -0.24
USP8-209ENST00000560297 ADAMTS10Q9H324 1103 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 GPRC5CQ9NQ84 441 aa13.58□□□□□ -0.24
USP8-209ENST00000560297 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
USP8-209ENST00000560297 KAT6AQ92794 2004 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 TBCAO75347 108 aaKnown RBP13.57□□□□□ -0.24
USP8-209ENST00000560297 GPR32O75388 356 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 FAM13AO94988 1023 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 CHRNA1P02708 482 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 PLS3P13797 630 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 GAP43P17677 238 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 GLRA2P23416 452 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 NAMPTP43490 491 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 GPC3P51654 580 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 ZNF131P52739 623 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 SMTNP53814 917 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 RAD51AP2Q09MP3 1159 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 MAPK7Q13164 816 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 DMP1Q13316 513 aaPredicted RBP13.57□□□□□ -0.24
USP8-209ENST00000560297 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 ODR4Q5SWX8 454 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 LRRC8DQ7L1W4 858 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 CCDC65Q8IXS2 484 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 DAW1Q8N136 415 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 TMEM199Q8N511 208 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 USP38Q8NB14 1042 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
USP8-209ENST00000560297 STAMQ92783 540 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms