RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 ADAM15Q13444 863 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 RRP1BQ14684 758 aaKnown RBP5.27□□□□□ -1.57
LRRC28-218ENST00000560236 FSTL4Q6MZW2 842 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 MRGPRGQ86SM5 289 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 PRG4Q92954 1404 aaPredicted RBP5.27□□□□□ -1.57
LRRC28-218ENST00000560236 CLIP3Q96DZ5 547 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 MPHOSPH9Q99550 1183 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 NDOR1Q9UHB4 597 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 COQ6Q9Y2Z9 468 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 VWA7Q9Y334 891 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 TEX14Q8IWB6 1497 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 ADAMTS12P58397 1594 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 RASSF10A6NK89 507 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 EFCAB14O75071 495 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 NANOS3P60323 173 aaKnown RBP5.26□□□□□ -1.57
LRRC28-218ENST00000560236 TMEM132BQ14DG7 1078 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 LONRF2Q1L5Z9 754 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 ZNF575Q86XF7 245 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 ANKRD35Q8N283 1001 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 RABGGTAQ92696 567 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 DLG3Q92796 817 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 CELF4Q9BZC1 486 aaKnown RBP5.26□□□□□ -1.57
LRRC28-218ENST00000560236 SLC52A2Q9HAB3 445 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 SLC2A4RGQ9NR83 387 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 SH3BP1Q9Y3L3 701 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 CTDP1Q9Y5B0 961 aaPredicted RBP5.26□□□□□ -1.57
LRRC28-218ENST00000560236 B3GALT1Q9Y5Z6 326 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 MAP3K4Q9Y6R4 1608 aa5.26□□□□□ -1.57
LRRC28-218ENST00000560236 KDM2BQ8NHM5 1336 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 ABCA10Q8WWZ4 1543 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-218ENST00000560236 SLC12A8A0AV02 714 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 GOLGA6L22H0YM25 854 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 HIP1RO75146 1068 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 MAFO75444 373 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-218ENST00000560236 RASGRP1O95267 797 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 TGM1P22735 817 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 SDHAP31040 664 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 STAT3P40763 770 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 ATP2C1P98194 919 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-218ENST00000560236 SAFB2Q14151 953 aaKnown RBP eCLIP5.25□□□□□ -1.57
LRRC28-218ENST00000560236 KLHDC10Q6PID8 442 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 ZNF627Q7L945 461 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 DNAJC10Q8IXB1 793 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 ERCC4Q92889 916 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-218ENST00000560236 LPPQ93052 612 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 ZNF428Q96B54 188 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 ZG16BQ96DA0 208 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 MAGEB10Q96LZ2 347 aaPredicted RBP5.25□□□□□ -1.57
LRRC28-218ENST00000560236 PRRX2Q99811 253 aa5.25□□□□□ -1.57
LRRC28-218ENST00000560236 PPFIA2O75334 1257 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 H2AFYO75367 372 aaKnown RBP5.24□□□□□ -1.57
LRRC28-218ENST00000560236 PEX11BO96011 259 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 SESN2P58004 480 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-218ENST00000560236 CNGB1Q14028 1251 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-218ENST00000560236 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 ZC3H12BQ5HYM0 836 aaKnown RBP5.24□□□□□ -1.57
LRRC28-218ENST00000560236 CATSPEREQ5SY80 951 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 NBPF6Q5VWK0 638 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 OVCH1Q7RTY7 1134 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 BCL6BQ8N143 479 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-218ENST00000560236 GSTCDQ8NEC7 633 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 NBPF4Q96M43 638 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 SIRPGQ9P1W8 387 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 SAE1Q9UBE0 346 aaPredicted RBP5.24□□□□□ -1.57
LRRC28-218ENST00000560236 PLB1Q6P1J6 1458 aa5.24□□□□□ -1.57
LRRC28-218ENST00000560236 PCF11O94913 1555 aaKnown RBP5.24□□□□□ -1.57
LRRC28-218ENST00000560236 KIAA0586Q9BVV6 1533 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 RAMP2O60895 175 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 SCNN1GP51170 649 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 ADCY7P51828 1080 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 ZC3H6P61129 1189 aaKnown RBP5.23□□□□□ -1.57
LRRC28-218ENST00000560236 ACAP1Q15027 740 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 ZNF662Q6ZS27 426 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 ULK2Q8IYT8 1036 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 GCDHQ92947 438 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-218ENST00000560236 GFM2Q969S9 779 aaKnown RBP5.23□□□□□ -1.57
LRRC28-218ENST00000560236 MIEF2Q96C03 454 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 SLC7A6OSQ96CW6 309 aaPredicted RBP5.23□□□□□ -1.57
LRRC28-218ENST00000560236 AGAP2Q99490 1192 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 SLC6A15Q9H2J7 730 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 DMRT1Q9Y5R6 373 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 ADAMTSL3P82987 1691 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 FHAD1B1AJZ9 1412 aa5.23□□□□□ -1.57
LRRC28-218ENST00000560236 CUL7Q14999 1698 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 GOLGA8BA8MQT2 603 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 IRF9Q00978 393 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 ALDH6A1Q02252 535 aaKnown RBP5.22□□□□□ -1.57
LRRC28-218ENST00000560236 Q6ZRM9 215 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 GAREM2Q75VX8 874 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 GSPT2Q8IYD1 628 aaKnown RBP5.22□□□□□ -1.57
LRRC28-218ENST00000560236 C2orf69Q8N8R5 385 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 SLC7A14Q8TBB6 771 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 RPL10LQ96L21 214 aaKnown RBP5.22□□□□□ -1.57
LRRC28-218ENST00000560236 CRAMP1Q96RY5 1269 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 FOXB1Q99853 325 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 SFMBT1Q9UHJ3 866 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 MAGEL2Q9UJ55 1249 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 DENND2AQ9ULE3 1009 aa5.22□□□□□ -1.57
LRRC28-218ENST00000560236 CCDC9Q9Y3X0 531 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms