RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 RFC5P40937 340 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 SARSP49591 514 aaKnown RBP14.78□□□□□ -0.04
SMAD3-213ENST00000560175 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
SMAD3-213ENST00000560175 NFX1Q12986 1120 aaKnown RBP14.78□□□□□ -0.04
SMAD3-213ENST00000560175 PDIA5Q14554 519 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 PLA2G4FQ68DD2 849 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 SLC24A5Q71RS6 500 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 NPAS4Q8IUM7 802 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 CEP170P1Q96L14 293 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 YME1L1Q96TA2 773 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 POLR3CQ9BUI4 534 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-213ENST00000560175 TUFT1Q9NNX1 390 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 C1orf112Q9NSG2 853 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 SUCLA2Q9P2R7 463 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-213ENST00000560175 GINS2Q9Y248 185 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 POTEMA6NI47 508 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 C5orf67F2Z3F1 127 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 OR52Z1P0C646 297 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 ATP2B1P20020 1258 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 MUTP22033 750 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 RPA1P27694 616 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 CYP4A11Q02928 519 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 GRB10Q13322 594 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 CATSPER3Q86XQ3 398 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 TPH2Q8IWU9 490 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 ARNTL2Q8WYA1 636 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 ADAM2Q99965 735 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 TRAIPQ9BWF2 469 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 ELAC1Q9H777 363 aaKnown RBP14.77□□□□□ -0.05
SMAD3-213ENST00000560175 CERS4Q9HA82 394 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 IFT122Q9HBG6 1241 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.77□□□□□ -0.05
SMAD3-213ENST00000560175 NOL7Q9UMY1 257 aaKnown RBP14.77□□□□□ -0.05
SMAD3-213ENST00000560175 PCDHB6Q9Y5E3 794 aa14.77□□□□□ -0.05
SMAD3-213ENST00000560175 COL4A4P53420 1690 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-213ENST00000560175 LAD1O00515 517 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 ASAP2O43150 1006 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 STAG3L1P0CL83 205 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 TECP42680 631 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 POU5F1BQ06416 359 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 PTGDRQ13258 359 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 EPC2Q52LR7 807 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 RILPL1Q5EBL4 403 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 XKR9Q5GH70 373 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 IGSF22Q8N9C0 903 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 SLC7A3Q8WY07 619 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 PPP1R16BQ96T49 567 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 C17orf80Q9BSJ5 609 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 GCOM2Q9BZD3 368 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-213ENST00000560175 XPNPEP1Q9NQW7 623 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 CHST12Q9NRB3 414 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-213ENST00000560175 SMC3Q9UQE7 1217 aa14.76□□□□□ -0.05
SMAD3-213ENST00000560175 ADGRA3Q8IWK6 1321 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 A0A087WZ62 844 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 H3BNC9 293 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 MED24O75448 989 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 RB1P06400 928 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 PRPHP41219 470 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 RARRES1P49788 294 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 GNL2Q13823 731 aaKnown RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 NBR1Q14596 966 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 IFNLR1Q8IU57 520 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 KSR1Q8IVT5 923 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 TMEM192Q8IY95 271 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 CMTR2Q8IYT2 770 aaKnown RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 FIBCD1Q8N539 461 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 SLC17A8Q8NDX2 589 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 TCP11Q8WWU5 503 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 PRPF31Q8WWY3 499 aaKnown RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 FDXACB1Q9BRP7 624 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 INO80BQ9C086 356 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 TMEM161AQ9NX61 479 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 DBR1Q9UK59 544 aaKnown RBP14.75□□□□□ -0.05
SMAD3-213ENST00000560175 VCANP13611 3396 aa14.75□□□□□ -0.05
SMAD3-213ENST00000560175 XIRP2A4UGR9 3374 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 KIAA1671Q9BY89 1806 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 A0A0U1RQF3 1178 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 DGAT1O75907 488 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 IGFBP4P22692 258 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 ARL2P36404 184 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 BMPR1AP36894 532 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 POLGP54098 1239 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-213ENST00000560175 LAMTOR4Q0VGL1 99 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 EMC2Q15006 297 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 IL17AQ16552 155 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 LARP1BQ659C4 914 aaKnown RBP14.74□□□□□ -0.05
SMAD3-213ENST00000560175 FERMT3Q86UX7 667 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 RHPN2Q8IUC4 686 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 NLRP7Q8WX94 980 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 PSPC1Q8WXF1 523 aaKnown RBP14.74□□□□□ -0.05
SMAD3-213ENST00000560175 NACC1Q96RE7 527 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 RWDD3Q9Y3V2 267 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 PCDHB7Q9Y5E2 793 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 COL4A3BPQ9Y5P4 624 aa14.74□□□□□ -0.05
SMAD3-213ENST00000560175 DENND3A2RUS2 1198 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 EOMESO95936 686 aa14.73□□□□□ -0.05
SMAD3-213ENST00000560175 ZSCAN20P17040 1043 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-213ENST00000560175 ATP2C1P98194 919 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms