RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MYZAPP0CAP1 466 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 FKBP1BP68106 108 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 SH3BP5LQ7L8J4 393 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 XXYLT1Q8NBI6 393 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 CYP2W1Q8TAV3 490 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 TRIM9Q9C026 710 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 MAP3K20Q9NYL2 800 aaKnown RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 ERAP1Q9NZ08 941 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 USTQ9Y2C2 406 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 CAPN7Q9Y6W3 813 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 A0A1B0GUA9 196 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 LRRN2O75325 713 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 ADORA2AP29274 412 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 NMT1P30419 496 aaKnown RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 TCF7P36402 384 aaPredicted RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 GABPAQ06546 454 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 DGKDQ16760 1214 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 FAM213AQ9BRX8 229 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 A1CFQ9NQ94 594 aaKnown RBP11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 SEL1LQ9UBV2 794 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 PKD1L3Q7Z443 1732 aa11.55□□□□□ -0.56
CARMIL3-202ENST00000559694 USP2O75604 605 aaPredicted RBP11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 RPA1P27694 616 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 CCT5P48643 541 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 MUM1L1Q5H9M0 696 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 FBXL16Q8N461 479 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 C2orf40Q9H1Z8 148 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 PLEKHA4Q9H4M7 779 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 PXMP2Q9NR77 195 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 ATP1A3P13637 1013 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 GNGT1P63211 74 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 COL9A3Q14050 684 aaPredicted RBP11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 PSMB7Q99436 277 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 SLC38A10Q9HBR0 1119 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 TOPORSQ9NS56 1045 aaPredicted RBP11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 PCDHB4Q9Y5E5 795 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 SAR1BQ9Y6B6 198 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 STAM2O75886 525 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 LDHAP00338 332 aaKnown RBP11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 ARHGAP25P42331 645 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 PTK2Q05397 1052 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 KNOP1Q1ED39 458 aaKnown RBP11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 C8orf74Q6P047 294 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 KATNAL1Q9BW62 490 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 TRIM17Q9Y577 477 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 TMEM88BA6NKF7 163 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 A6NNZ2 444 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 NR3C1P04150 777 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 ARPP19P56211 112 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 TUBB8Q3ZCM7 444 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 RNF180Q86T96 592 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 CCDC117Q8IWD4 279 aaPredicted RBP11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 ANKS4BQ8N8V4 417 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 EPC1Q9H2F5 836 aa11.54□□□□□ -0.56
CARMIL3-202ENST00000559694 STRCP1A6NGW2 1772 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 TFRCP02786 760 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 CYP2C9P11712 490 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 CD58P19256 250 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 RNASE9P60153 205 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 HINFPQ9BQA5 517 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 MFAP3P55082 362 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 CATSPER3Q86XQ3 398 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 IQCDQ96DY2 449 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 HBP1O60381 514 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 OAZ1P54368 228 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 CC2D1AQ6P1N0 951 aaPredicted RBP11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 RSRC1Q96IZ7 334 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 MRPL4Q9BYD3 311 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 IFIH1Q9BYX4 1025 aaKnown RBP11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 NDST4Q9H3R1 872 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 UNC45AQ9H3U1 944 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 NHSL1Q5SYE7 1610 aa11.53□□□□□ -0.56
CARMIL3-202ENST00000559694 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 MAGEB2O15479 319 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 TOB1P50616 345 aaPredicted RBP11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 SURF1Q15526 300 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 ICE2Q659A1 982 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 AFG1LQ8WV93 481 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 WNK4Q96J92 1243 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 GCNT4Q9P109 453 aa11.52□□□□□ -0.56
CARMIL3-202ENST00000559694 TLDC2A0PJX2 215 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 MYMKA6NI61 221 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 CASP14P31944 242 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 CYP2C19P33261 490 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 GCLMP48507 274 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 CPT1AP50416 773 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 PDE6CP51160 858 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 CLNS1AP54105 237 aaKnown RBP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 GSTA5Q7RTV2 222 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 SLC35F6Q8N357 371 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 SAMD3Q8N6K7 520 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms