RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ATF7P17544 494 aaPredicted RBP14.81□□□□□ -0.04
TPM1-220ENST00000559556 NLRP11P59045 1033 aaKnown RBP14.81□□□□□ -0.04
TPM1-220ENST00000559556 PLCB3Q01970 1234 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 TMEM184AQ6ZMB5 413 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 BMP8AQ7Z5Y6 402 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 CCDC148Q8NFR7 591 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 PHKBQ93100 1093 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 JAKMIP1Q96N16 626 aaKnown RBP14.81□□□□□ -0.04
TPM1-220ENST00000559556 CASD1Q96PB1 797 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 PHF7Q9BWX1 381 aaPredicted RBP14.81□□□□□ -0.04
TPM1-220ENST00000559556 RNF26Q9BY78 433 aaPredicted RBP14.81□□□□□ -0.04
TPM1-220ENST00000559556 TMEM117Q9H0C3 514 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 ADAMTS10Q9H324 1103 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 AKT3Q9Y243 479 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 FANCMQ8IYD8 2048 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 MYH11P35749 1972 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 PER2O15055 1255 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 EDIL3O43854 480 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 OATP04181 439 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 EIF4BP23588 611 aaKnown RBP14.8□□□□□ -0.04
TPM1-220ENST00000559556 TMOD1P28289 359 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 HSPA4P34932 840 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 PPM1AP35813 382 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 RBM10P98175 930 aaKnown RBP14.8□□□□□ -0.04
TPM1-220ENST00000559556 PRKCEQ02156 737 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 EFCAB12Q6NXP0 572 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 BLOC1S2Q6QNY1 142 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 LRRC55Q6ZSA7 311 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 TRMT1LQ7Z2T5 733 aaKnown RBP14.8□□□□□ -0.04
TPM1-220ENST00000559556 ALYREFQ86V81 257 aaKnown RBP14.8□□□□□ -0.04
TPM1-220ENST00000559556 LRRC43Q8N309 656 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 LRRC71Q8N4P6 559 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 MICAL1Q8TDZ2 1067 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 MRPS27Q92552 414 aaKnown RBP14.8□□□□□ -0.04
TPM1-220ENST00000559556 DISC1Q9NRI5 854 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 SAMM50Q9Y512 469 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 SNX14Q9Y5W7 946 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 MIA3Q5JRA6 1907 aa14.8□□□□□ -0.04
TPM1-220ENST00000559556 MSH4O15457 936 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 SRGAP2BP0DMP2 458 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 IFNAR1P17181 557 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 RPS6KB1P23443 525 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 MRE11P49959 708 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 GPC3P51654 580 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 AKAP17AQ02040 695 aaKnown RBP14.79□□□□□ -0.04
TPM1-220ENST00000559556 UGCGQ16739 394 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 PLPP4Q5VZY2 271 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 KCNT2Q6UVM3 1135 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 TRIM67Q6ZTA4 783 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 ECHDC2Q86YB7 292 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 SLC5A5Q92911 643 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 RIT2Q99578 217 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 MYH15Q9Y2K3 1946 aa14.79□□□□□ -0.04
TPM1-220ENST00000559556 GVINP1Q7Z2Y8 2422 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 CITO14578 2027 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 TMEM221A6NGB7 291 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 M0R296 226 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 GAS7O60861 476 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 DARSP14868 501 aaKnown RBP14.78□□□□□ -0.04
TPM1-220ENST00000559556 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
TPM1-220ENST00000559556 SFNP31947 248 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 USP11P51784 963 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 JAK3P52333 1124 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 EVCP57679 992 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 ZXDAP98168 799 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 CLLU1OSQ5K130 101 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 LRCH2Q5VUJ6 765 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 ABI1Q8IZP0 508 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 ZNF558Q96NG5 402 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 TCF25Q9BQ70 676 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
TPM1-220ENST00000559556 ENTPD7Q9NQZ7 604 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 SH3GLB2Q9NR46 395 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 NRBP2Q9NSY0 501 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
TPM1-220ENST00000559556 PUF60Q9UHX1 559 aaKnown RBP14.78□□□□□ -0.04
TPM1-220ENST00000559556 VWA8A3KMH1 1905 aa14.77□□□□□ -0.04
TPM1-220ENST00000559556 A0A0U1RQF3 1178 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 TBC1D8BQ0IIM8 1120 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 TARBP2Q15633 366 aaKnown RBP14.77□□□□□ -0.05
TPM1-220ENST00000559556 ANKRD54Q6NXT1 300 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 ZNF598Q86UK7 904 aaKnown RBP14.77□□□□□ -0.05
TPM1-220ENST00000559556 RDM1Q8NG50 284 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 RPGRIP1Q96KN7 1286 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 TEKT3Q9BXF9 490 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 SLC26A6Q9BXS9 759 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 S1PR5Q9H228 398 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 UNC45AQ9H3U1 944 aa14.77□□□□□ -0.05
TPM1-220ENST00000559556 DMXL1Q9Y485 3027 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 HIDE1A8MVS5 230 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 CHMP2AO43633 222 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 PSMD10O75832 226 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 EOMESO95936 686 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 HOXB8P17481 243 aaPredicted RBP14.76□□□□□ -0.05
TPM1-220ENST00000559556 PBX3P40426 434 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 TECP42680 631 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 KRT17Q04695 432 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 SIGLEC14Q08ET2 396 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 SYCE2Q6PIF2 218 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms