RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 PCDHB12Q9Y5F1 795 aa23.09■■□□□ 1.29
TSPAN3-206ENST00000559373 CYP3A7-CYP3A51PA0A087WV96 503 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 STBD1O95210 358 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 EIF4BP23588 611 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 CYP3A7P24462 503 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 ERVFC1P60507 584 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 FAM189BP81408 668 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 NONOQ15233 471 aaKnown RBP eCLIP23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 NAALADL2Q58DX5 795 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 CPLX2Q6PUV4 134 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 LRRC55Q6ZSA7 311 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 THNSL1Q8IYQ7 743 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 ETNPPLQ8TBG4 499 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 OXER1Q8TDS5 423 aa23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 DDX25Q9UHL0 483 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 BARX2Q9UMQ3 279 aaPredicted RBP23.08■■□□□ 1.29
TSPAN3-206ENST00000559373 DDX11L8A8MPP1 907 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 EML1O00423 815 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 EPB41L2O43491 1005 aaKnown RBP23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 NCK2O43639 380 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 FGF18O76093 207 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 NEFLP07196 543 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 ZSCAN20P17040 1043 aaPredicted RBP23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 TARBP2Q15633 366 aaKnown RBP23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 LONRF3Q496Y0 759 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 PLA2G4FQ68DD2 849 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 DAGLBQ8NCG7 672 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 CASD1Q96PB1 797 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 SLKQ9H2G2 1235 aaPredicted RBP23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 CD207Q9UJ71 328 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 MYO10Q9HD67 2058 aa23.07■■□□□ 1.28
TSPAN3-206ENST00000559373 GLP2RO95838 553 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 ECHDC2Q86YB7 292 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 KSR1Q8IVT5 923 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 PHF20Q9BVI0 1012 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 C22orf23Q9BZE7 217 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 TLE6Q9H808 572 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 CLEC1BQ9P126 229 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 FAM50BQ9Y247 325 aa23.06■■□□□ 1.28
TSPAN3-206ENST00000559373 FAM205CA6NFA0 338 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 GPR37L1O60883 481 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 DARSP14868 501 aaKnown RBP23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 SMAD2Q15796 467 aaKnown RBP23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 PLPP4Q5VZY2 271 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 B3GNT9Q6UX72 402 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 KRT25Q7Z3Z0 450 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 ADHFE1Q8IWW8 467 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 NECAB1Q8N987 351 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 MBOAT7Q96N66 472 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 CEP89Q96ST8 783 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 TLR9Q9NR96 1032 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 AAASQ9NRG9 546 aa23.05■■□□□ 1.28
TSPAN3-206ENST00000559373 A0A087WZ62 844 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 CCDC194A0A1B0GVG4 234 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 CTDNEP1O95476 244 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 FOSBP53539 338 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 XKR3Q5GH77 459 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 EARS2Q5JPH6 523 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 CLLU1OSQ5K130 101 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 PIK3AP1Q6ZUJ8 805 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 RHPN2Q8IUC4 686 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 EFHBQ8N7U6 833 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 ZNF579Q8NAF0 562 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 HELQQ8TDG4 1101 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 PPP2R3CQ969Q6 453 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 MSLNLQ96KJ4 702 aa23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 FDXACB1Q9BRP7 624 aaPredicted RBP23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 NIFKQ9BYG3 293 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 ELAC1Q9H777 363 aaKnown RBP23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 BMP2KQ9NSY1 1161 aaPredicted RBP23.04■■□□□ 1.28
TSPAN3-206ENST00000559373 C19orf67A6NJJ6 358 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 NPEPPSP55786 919 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 SMAD4Q13485 552 aaKnown RBP23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 GALNT17Q6IS24 598 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 ANO5Q75V66 913 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 VN1R2Q8NFZ6 395 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 RDM1Q8NG50 284 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 TMEM117Q9H0C3 514 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 RNF216Q9NWF9 866 aaPredicted RBP23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 TDRD15B5MCY1 1934 aaKnown RBP23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 WDFY4Q6ZS81 3184 aa23.03■■□□□ 1.28
TSPAN3-206ENST00000559373 CCNT1O60563 726 aaKnown RBP23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 PFKFB2O60825 505 aa23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 LARGE1O95461 756 aa23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 AK2P54819 239 aa23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 ABI1Q8IZP0 508 aa23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 LPPQ93052 612 aa23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 APOL5Q9BWW9 433 aa23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 GCOM2Q9BZD3 368 aaPredicted RBP23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 SUCLA2Q9P2R7 463 aaPredicted RBP23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 WRAP73Q9P2S5 460 aaPredicted RBP23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 ORC3Q9UBD5 711 aaPredicted RBP23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 PRKAG3Q9UGI9 489 aa23.02■■□□□ 1.28
TSPAN3-206ENST00000559373 NT5C1B-RDH14C9J2C7 533 aa23.01■■□□□ 1.27
TSPAN3-206ENST00000559373 ATF7P17544 494 aaPredicted RBP23.01■■□□□ 1.27
TSPAN3-206ENST00000559373 LAG3P18627 525 aa23.01■■□□□ 1.27
TSPAN3-206ENST00000559373 LLGL2Q6P1M3 1020 aa23.01■■□□□ 1.27
TSPAN3-206ENST00000559373 KCNT2Q6UVM3 1135 aa23.01■■□□□ 1.27
TSPAN3-206ENST00000559373 MOXD1Q6UVY6 613 aa23.01■■□□□ 1.27
TSPAN3-206ENST00000559373 NEK8Q86SG6 692 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms