RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 F8W031 263 aaPredicted RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 K7ESF4 209 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ACOT7O00154 380 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 SGSM2O43147 1006 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 HIP1RO75146 1068 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 TADA3O75528 432 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ZRANB2O95218 330 aaKnown RBP eCLIP2.18□□□□□ -2.06
USP3-209ENST00000558925 MMEP08473 750 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 GLI4P10075 376 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 PF4V1P10720 104 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 OSMP13725 252 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ZSCAN20P17040 1043 aaPredicted RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 PTPN1P18031 435 aaKnown RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 MC4RP32245 332 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 GNALP38405 381 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 IL12RB1P42701 662 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 GPR3P46089 330 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 FXR1P51114 621 aaKnown RBP eCLIP2.18□□□□□ -2.06
USP3-209ENST00000558925 SESN3P58005 492 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 SRSF2Q01130 221 aaKnown RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 OCRLQ01968 901 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 SPIRE1Q08AE8 756 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ZNF174Q15697 407 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ARHGAP44Q17R89 818 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 MAP9Q49MG5 647 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 EMC4Q5J8M3 183 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 FAM102BQ5T8I3 360 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 MROH9Q5TGP6 573 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 BTBD8Q5XKL5 378 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 BICRALQ6AI39 1079 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 GLB1LQ6UWU2 654 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 KCTD1Q719H9 257 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 PNMA8AQ86V59 439 aaPredicted RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 RIOX2Q8IUF8 465 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 PASD1Q8IV76 773 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 LGI4Q8N135 537 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 MYO1HQ8N1T3 1032 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 MAGEB6Q8N7X4 407 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 LINC00482Q8N8I6 264 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ZNF610Q8N9Z0 462 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ARRDC4Q8NCT1 418 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 CLEC4DQ8WXI8 215 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 DLG3Q92796 817 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ZBTB8AQ96BR9 441 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 DDX11Q96FC9 970 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ZNF496Q96IT1 587 aaPredicted RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 FAXDC2Q96IV6 333 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 LRGUKQ96M69 825 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 SLC2A13Q96QE2 648 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 QRSL1Q9H0R6 528 aaKnown RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 PCIF1Q9H4Z3 704 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ANLNQ9NQW6 1124 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 PDLIM7Q9NR12 457 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 CHST12Q9NRB3 414 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 CCM2LQ9NUG4 571 aaPredicted RBP2.18□□□□□ -2.06
USP3-209ENST00000558925 MYOTQ9UBF9 498 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 RBPJLQ9UBG7 517 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 B3GALT1Q9Y5Z6 326 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 ATP23Q9Y6H3 246 aa2.18□□□□□ -2.06
USP3-209ENST00000558925 GOLGA8AA7E2F4 631 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 GOLGA8BA8MQT2 603 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 ELL2O00472 640 aaPredicted RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 KRIT1O00522 736 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 HGSO14964 777 aaPredicted RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 FOXP2O15409 715 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 XPOTO43592 962 aaKnown RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 CLASP2O75122 1294 aaKnown RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 SNUPNO95149 360 aaKnown RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 LPLP06858 475 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 CT47B1P0C2W7 299 aaPredicted RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 MYBP10242 640 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 RBP3P10745 1247 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 LSP1P33241 339 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 CORO7P57737 925 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 PHC1P78364 1004 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 CLUL1Q15846 466 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 CT83Q5H943 113 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 TOR2AQ5JU69 321 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 ZBTB41Q5SVQ8 909 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 MCTP2Q6DN12 878 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 RTN4RL1Q86UN2 441 aaPredicted RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 RASSF3Q86WH2 238 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 TCEAL8Q8IYN2 117 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 CMTR2Q8IYT2 770 aaKnown RBP2.17□□□□□ -2.06
USP3-209ENST00000558925 CPA6Q8N4T0 437 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 NLGN2Q8NFZ4 835 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 IGDCC4Q8TDY8 1250 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 LMBR1Q8WVP7 490 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 ALG3Q92685 438 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 TIFAQ96CG3 184 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 C16orf92Q96LL3 132 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 TEKT5Q96M29 485 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 GORASP1Q9BQQ3 440 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 POLR3GLQ9BT43 218 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 ANO3Q9BYT9 981 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 ZDHHC5Q9C0B5 715 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 POFUT1Q9H488 388 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 KCNH7Q9NS40 1196 aa2.17□□□□□ -2.06
USP3-209ENST00000558925 MKS1Q9NXB0 559 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms