RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 USP6NLQ92738 828 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 APBA2Q99767 749 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 DESI2Q9BSY9 194 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 IGSF9BQ9UPX0 1349 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 ASB14A6NK59 587 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 GNA14O95837 355 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 FLT3LGP49771 235 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 NPEPPSP55786 919 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 MEA1Q16626 185 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 GNPTABQ3T906 1256 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 ODR4Q5SWX8 454 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 TRIM65Q6PJ69 517 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-207ENST00000558763 KSR1Q8IVT5 923 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 FAM178BQ8IXR5 827 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 RETREG2Q8NC44 543 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 ANKEF1Q9NU02 776 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 FLRT1Q9NZU1 646 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 SLC9A2Q9UBY0 812 aa14.25□□□□□ -0.13
SMAD3-207ENST00000558763 DIS3Q9Y2L1 958 aaKnown RBP14.25□□□□□ -0.13
SMAD3-207ENST00000558763 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 USO1O60763 962 aaKnown RBP14.24□□□□□ -0.13
SMAD3-207ENST00000558763 AKAP3O75969 853 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 NR3C1P04150 777 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 TPM2P07951 284 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 HOXC6P09630 235 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 ACTR2P61160 394 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 BORCS6Q96GS4 357 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 ERO1AQ96HE7 468 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 TINF2Q9BSI4 451 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 GABBR1Q9UBS5 961 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 ADGRG1Q9Y653 693 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
SMAD3-207ENST00000558763 A0A0U1RQJ8 604 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CETN3O15182 167 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 ATG7O95352 703 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 TPM1P09493 284 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CASP4P49662 377 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 DPY19L2P1Q6NXN4 242 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 OR8K1Q8NGG5 319 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 MORC4Q8TE76 937 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 ATRIPQ8WXE1 791 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 PRIMPOLQ96LW4 560 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CHP1Q99653 195 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 NUP58Q9BVL2 599 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 GPRC5CQ9NQ84 441 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-207ENST00000558763 LUC7L2Q9Y383 392 aaKnown RBP14.23□□□□□ -0.13
SMAD3-207ENST00000558763 LOC102724159A0A0B4J2E5 919 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CALUO43852 315 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-207ENST00000558763 SORBS3O60504 671 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 MAPTP10636 758 aaKnown RBP14.23□□□□□ -0.13
SMAD3-207ENST00000558763 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
SMAD3-207ENST00000558763 UBA1P22314 1058 aaKnown RBP14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CYP2C19P33261 490 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 PWP2Q15269 919 aaKnown RBP14.23□□□□□ -0.13
SMAD3-207ENST00000558763 MAMDC4Q6UXC1 1216 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 FRMD5Q7Z6J6 570 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 PDLIM7Q9NR12 457 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 DMAC2Q9NW81 257 aa14.23□□□□□ -0.13
SMAD3-207ENST00000558763 CLIC2O15247 247 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
SMAD3-207ENST00000558763 CCP110O43303 1012 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 NOL4O94818 638 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 SNAI1O95863 264 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-207ENST00000558763 SUPT20HL2P0C7V6 817 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 PLS3P13797 630 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 ATP4AP20648 1035 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 ZBED6P86452 979 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 MAEAQ7L5Y9 396 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 BAP1Q92560 729 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 TIPINQ9BVW5 301 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 ST6GALNAC4Q9H4F1 302 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 PDGFCQ9NRA1 345 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-207ENST00000558763 CASP8AP2Q9UKL3 1982 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 IGKV6D-21A0A0A0MT36 114 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 ZSCAN12O43309 604 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 FARP2O94887 1054 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-207ENST00000558763 PSAPP07602 524 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 HNRNPH3P31942 346 aaKnown RBP14.22□□□□□ -0.13
SMAD3-207ENST00000558763 SP4Q02446 784 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 XKR9Q5GH70 373 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 SWSAP1Q6NVH7 229 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 CYP26C1Q6V0L0 522 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 CYFIP1Q7L576 1253 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 MYRIPQ8NFW9 859 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 TRIB2Q92519 343 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 XPNPEP1Q9NQW7 623 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 AGPAT3Q9NRZ7 376 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 FAM207AQ9NSI2 230 aaPredicted RBP14.22□□□□□ -0.13
SMAD3-207ENST00000558763 SRRDQ9UH36 339 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 TCEAL9Q9UHQ7 104 aa14.22□□□□□ -0.13
SMAD3-207ENST00000558763 REXO2Q9Y3B8 237 aaKnown RBP14.22□□□□□ -0.13
SMAD3-207ENST00000558763 SIP14410 1827 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms