RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ZNF70Q9UC06 446 aaPredicted RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 CGGBP1Q9UFW8 167 aaPredicted RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 AKT3Q9Y243 479 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 NOP58Q9Y2X3 529 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 SF3B6Q9Y3B4 125 aaKnown RBP5.21□□□□□ -1.58
SPG11-211ENST00000558561 CASP8AP2Q9UKL3 1982 aa5.21□□□□□ -1.58
SPG11-211ENST00000558561 CNTNAP1P78357 1384 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 TMEM82A0PJX8 343 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 FAM221BA6H8Z2 402 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 RASSF10A6NK89 507 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 SMIM22K7EJ46 135 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 TBX1O43435 398 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 FRAT2O75474 233 aaPredicted RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 ITGAVP06756 1048 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 HSPA1AP0DMV8 641 aaKnown RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 HSPA1BP0DMV9 641 aaKnown RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 SLC5A1P13866 664 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 MCAMP43121 646 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 ZNF143P52747 638 aaPredicted RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 HUNKP57058 714 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 KIF23Q02241 960 aaPredicted RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 RASA3Q14644 834 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 DPY19L1Q2PZI1 675 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 SLC10A6Q3KNW5 377 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 CWF19L1Q69YN2 538 aaKnown RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 MIGA2Q7L4E1 593 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 ADGRA1Q86SQ6 560 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 BVESQ8NE79 360 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 CAPNS2Q96L46 248 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 ALPK1Q96QP1 1244 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 MCMBPQ9BTE3 642 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 SLC12A9Q9BXP2 914 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 TMEM39BQ9GZU3 492 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 DEFB129Q9H1M3 183 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 VEZTQ9HBM0 779 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 GBA2Q9HCG7 927 aaPredicted RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 PIH1D3Q9NQM4 214 aaKnown RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 LRP2BPQ9P2M1 347 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 EBF1Q9UH73 591 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 DBNLQ9UJU6 430 aaKnown RBP5.2□□□□□ -1.58
SPG11-211ENST00000558561 ZNF281Q9Y2X9 895 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 EMC9Q9Y3B6 208 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 MSRB2Q9Y3D2 182 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 FPGT-TNNI3KV9GXZ4 949 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 MYH2Q9UKX2 1941 aa5.2□□□□□ -1.58
SPG11-211ENST00000558561 AK9Q5TCS8 1911 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 ZNF205O95201 554 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 KCNH1O95259 989 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 CD3EP07766 207 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 GSTM1P09488 218 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 NAT2P11245 290 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 IFNGR1P15260 489 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 HK2P52789 917 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 DYNLL1P63167 89 aaKnown RBP5.19□□□□□ -1.58
SPG11-211ENST00000558561 CAP1Q01518 475 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 TCP10Q12799 353 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 RRP1BQ14684 758 aaKnown RBP5.19□□□□□ -1.58
SPG11-211ENST00000558561 CAVIN4Q5BKX8 364 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 RTP2Q5QGT7 225 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 TSHZ3Q63HK5 1081 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 CDC42EP5Q6NZY7 148 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 EXOC6Q8TAG9 804 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 OTUD7AQ8TE49 926 aaPredicted RBP5.19□□□□□ -1.58
SPG11-211ENST00000558561 MRGPRX3Q96LB0 322 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 FCRL3Q96P31 734 aaPredicted RBP5.19□□□□□ -1.58
SPG11-211ENST00000558561 CDADC1Q9BWV3 514 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 LNPKQ9C0E8 428 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 CCDC113Q9H0I3 377 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 RC3H2Q9HBD1 1191 aaKnown RBP5.19□□□□□ -1.58
SPG11-211ENST00000558561 DDX4Q9NQI0 724 aaKnown RBP5.19□□□□□ -1.58
SPG11-211ENST00000558561 AP5S1Q9NUS5 200 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 USP40Q9NVE5 1235 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 C19orf73Q9NVV2 129 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.19□□□□□ -1.58
SPG11-211ENST00000558561 ABCF2Q9UG63 623 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 ADGRE2Q9UHX3 823 aa5.19□□□□□ -1.58
SPG11-211ENST00000558561 SSC5DA1L4H1 1573 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 NOP56O00567 594 aaKnown RBP5.18□□□□□ -1.58
SPG11-211ENST00000558561 PDPK1O15530 556 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 IGHDP01880 384 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 ZGLP1P0C6A0 271 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 LBX1P52954 281 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 RRP1P56182 461 aaKnown RBP5.18□□□□□ -1.58
SPG11-211ENST00000558561 ERVFC1P60507 584 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 FKBP1AP62942 108 aaKnown RBP5.18□□□□□ -1.58
SPG11-211ENST00000558561 JAG1P78504 1218 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 POU4F1Q01851 419 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 MECOMQ03112 1051 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 OS9Q13438 667 aaPredicted RBP5.18□□□□□ -1.58
SPG11-211ENST00000558561 SHROOM1Q2M3G4 852 aaPredicted RBP5.18□□□□□ -1.58
SPG11-211ENST00000558561 CCDC144BQ3MJ40 725 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 RGMBQ6NW40 437 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 SPATC1Q76KD6 591 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 ZNF227Q86WZ6 799 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 DEPDC7Q96QD5 511 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 G6PC3Q9BUM1 346 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 OSBPL2Q9H1P3 480 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 SNTG2Q9NY99 539 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 ZMYM5Q9UJ78 669 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 TMEM59LQ9UK28 342 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms