RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 KRT31Q15323 416 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 LRRC41Q15345 812 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 ANKRD40Q6AI12 368 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 CENPPQ6IPU0 288 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 ARMCX5Q6P1M9 558 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 XRRA1Q6P2D8 792 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 VSTM4Q8IW00 320 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 C17orf53Q8N3J3 647 aaPredicted RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 MB21D1Q8N884 522 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 NSUN6Q8TEA1 469 aaKnown RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 PIGOQ8TEQ8 1089 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 P2RX5Q93086 422 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 CCDC47Q96A33 483 aaKnown RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 INPP4AQ96PE3 977 aaPredicted RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 MOV10L1Q9BXT6 1211 aaKnown RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 GRIP2Q9C0E4 1043 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 LRRC27Q9C0I9 530 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 MAF1Q9H063 256 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 BHMT2Q9H2M3 363 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 ZNF408Q9H9D4 720 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 PANK4Q9NVE7 773 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 RBPJLQ9UBG7 517 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 ADD3Q9UEY8 706 aaKnown RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 LIMA1Q9UHB6 759 aaKnown RBP8.19□□□□□ -1.1
SPG11-204ENST00000557866 TELO2Q9Y4R8 837 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 WDR90Q96KV7 1748 aa8.19□□□□□ -1.1
SPG11-204ENST00000557866 RSPH10B2B2RC85 870 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 PSMA7O14818 248 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 NKRFO15226 690 aaKnown RBP eCLIP8.18□□□□□ -1.1
SPG11-204ENST00000557866 ZNF500O60304 480 aaPredicted RBP8.18□□□□□ -1.1
SPG11-204ENST00000557866 RSPH10BP0C881 870 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 KCNA2P16389 499 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 ERCC3P19447 782 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 MUTP22033 750 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 PBX1P40424 430 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 RAD51AP2Q09MP3 1159 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 PSMD2Q13200 908 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 TBX2Q13207 712 aaPredicted RBP8.18□□□□□ -1.1
SPG11-204ENST00000557866 SNAPC2Q13487 334 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 STIM1Q13586 685 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 RINT1Q6NUQ1 792 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 C1orf186Q6ZWK4 172 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 FASTKD5Q7L8L6 764 aaKnown RBP8.18□□□□□ -1.1
SPG11-204ENST00000557866 MIER3Q7Z3K6 550 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 CCDC65Q8IXS2 484 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 GUF1Q8N442 669 aaKnown RBP8.18□□□□□ -1.1
SPG11-204ENST00000557866 KCTD17Q8N5Z5 321 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 GPRASP2Q96D09 838 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 FGD4Q96M96 766 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 REEP2Q9BRK0 252 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 LXNQ9BS40 222 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 PAGR1Q9BTK6 254 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 SRRTQ9BXP5 876 aaKnown RBP8.18□□□□□ -1.1
SPG11-204ENST00000557866 GTPBP4Q9BZE4 634 aaKnown RBP8.18□□□□□ -1.1
SPG11-204ENST00000557866 POLD4Q9HCU8 107 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 TBC1D7Q9P0N9 293 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 IMPACTQ9P2X3 320 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 OTOFQ9HC10 1997 aa8.18□□□□□ -1.1
SPG11-204ENST00000557866 UNCXA6NJT0 531 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 SPATA31C2B4DYI2 1134 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 KCNJ18B7U540 433 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 LYPLA2O95372 231 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 P4HBP07237 508 aaKnown RBP8.17□□□□□ -1.1
SPG11-204ENST00000557866 EDNRBP24530 442 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 HOXD13P35453 343 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 PPP1R2P41236 205 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 CASP5P51878 434 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 COPB1P53618 953 aaKnown RBP8.17□□□□□ -1.1
SPG11-204ENST00000557866 CCZ1BP86790 482 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 CCZ1P86791 482 aaPredicted RBP8.17□□□□□ -1.1
SPG11-204ENST00000557866 SP2Q02086 613 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 GOLGA8FQ08AF8 430 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 GOLGA8DPQ0D2H9 430 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 POU4F2Q12837 409 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 USP4Q13107 963 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 KCNJ12Q14500 433 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 UGCGQ16739 394 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 TPD52L1Q16890 204 aaPredicted RBP8.17□□□□□ -1.1
SPG11-204ENST00000557866 ZCWPW2Q504Y3 356 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 HERC4Q5GLZ8 1057 aaPredicted RBP8.17□□□□□ -1.1
SPG11-204ENST00000557866 TCP11X2Q5H9J9 407 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 FAM26FQ5R3K3 315 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 NCAPG2Q86XI2 1143 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 LRRC8AQ8IWT6 810 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 FAM133AQ8N9E0 248 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 KIAA1524Q8TCG1 905 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 NEK9Q8TD19 979 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 SCFD1Q8WVM8 642 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 BRI3BPQ8WY22 251 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 EEF2KMTQ96G04 330 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 NACC1Q96RE7 527 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 SENP7Q9BQF6 1050 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 THAP9Q9H5L6 903 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 GBA2Q9HCG7 927 aaPredicted RBP8.17□□□□□ -1.1
SPG11-204ENST00000557866 NMRK2Q9NPI5 230 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 TBC1D22BQ9NU19 505 aa8.17□□□□□ -1.1
SPG11-204ENST00000557866 TAB2Q9NYJ8 693 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms