RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 RNPEPQ9H4A4 650 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 ZMYM2Q9UBW7 1377 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 TRPA1O75762 1119 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 LGALS2P05162 132 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 PTMAP06454 111 aaKnown RBP11.93□□□□□ -0.5
LINC01550-206ENST00000556462 NPTX2P47972 431 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 FLT3LGP49771 235 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 GTF2BQ00403 316 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 SP3Q02447 781 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 EMC2Q15006 297 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 HAUS6Q7Z4H7 955 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 VSTM4Q8IW00 320 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 TYW1Q9NV66 732 aaKnown RBP11.93□□□□□ -0.5
LINC01550-206ENST00000556462 RNF186Q9NXI6 227 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 TAB2Q9NYJ8 693 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 MYH11P35749 1972 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 K7ENM7 598 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 SLC16A4O15374 487 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 MAFO75444 373 aaPredicted RBP11.93□□□□□ -0.5
LINC01550-206ENST00000556462 FGFR1OPO95684 399 aaKnown RBP11.93□□□□□ -0.5
LINC01550-206ENST00000556462 TPM3P06753 285 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 PBX1P40424 430 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 RFC5P40937 340 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 ADAM9Q13443 819 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 STXBP4Q6ZWJ1 553 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 CCDC186Q7Z3E2 898 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 FILIP1Q7Z7B0 1213 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 FAM114A1Q8IWE2 563 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 TMEM161BQ8NDZ6 487 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 ANKRD20A12PQ8NF67 263 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 OR6J1Q8NGC5 347 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 TMEM143Q96AN5 459 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 CEP63Q96MT8 703 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 TUBGCP2Q9BSJ2 902 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 ERAP1Q9NZ08 941 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 MAGEC2Q9UBF1 373 aaPredicted RBP11.93□□□□□ -0.5
LINC01550-206ENST00000556462 PPME1Q9Y570 386 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 UBE4BO95155 1302 aa11.93□□□□□ -0.5
LINC01550-206ENST00000556462 ARID2Q68CP9 1835 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 GOLGA6L6A8MZA4 724 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 N4BP3O15049 544 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 DYNC1LI2O43237 492 aaPredicted RBP11.92□□□□□ -0.5
LINC01550-206ENST00000556462 HBP1O60381 514 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 MMP3P08254 477 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 ARL2P36404 184 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 PRKCZQ05513 592 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 DMP1Q13316 513 aaPredicted RBP11.92□□□□□ -0.5
LINC01550-206ENST00000556462 ALCAMQ13740 583 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 POLR3FQ9H1D9 316 aaPredicted RBP11.92□□□□□ -0.5
LINC01550-206ENST00000556462 IMPACTQ9P2X3 320 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 ZSWIM8A7E2V4 1837 aa11.92□□□□□ -0.5
LINC01550-206ENST00000556462 IGKV6-21A0A0C4DH24 114 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 A6NJR5 290 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 CCDC169A6NNP5 214 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 CLIC2O15247 247 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 CALUO43852 315 aaPredicted RBP11.91□□□□□ -0.5
LINC01550-206ENST00000556462 NR2F2P24468 414 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 SMTNP53814 917 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
LINC01550-206ENST00000556462 DRP2Q13474 957 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 NFIL3Q16649 462 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 MIIPQ5JXC2 388 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 SLC17A8Q8NDX2 589 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 TRIB2Q92519 343 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 ZNF830Q96NB3 372 aaPredicted RBP11.91□□□□□ -0.5
LINC01550-206ENST00000556462 KIFC3Q9BVG8 833 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 GBP3Q9H0R5 595 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 KMT5AQ9NQR1 393 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 ADGRA3Q8IWK6 1321 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 MGAMO43451 1857 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 CETN3O15182 167 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 ZNF286BP0CG31 522 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 GLRA2P23416 452 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 HTTP42858 3142 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
LINC01550-206ENST00000556462 TBC1D8BQ0IIM8 1120 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
LINC01550-206ENST00000556462 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 DGKDQ16760 1214 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 TRPV1Q8NER1 839 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 ASAP3Q8TDY4 903 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 TRAPPC12Q8WVT3 735 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 LENG1Q96BZ8 264 aaPredicted RBP11.91□□□□□ -0.5
LINC01550-206ENST00000556462 TMEM206Q9H813 350 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 AGPAT3Q9NRZ7 376 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 DMAC2Q9NW81 257 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 ARHGAP28Q9P2N2 729 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 FAM184BQ9ULE4 1060 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
LINC01550-206ENST00000556462 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
LINC01550-206ENST00000556462 H3BRB1 525 aa11.9□□□□□ -0.5
LINC01550-206ENST00000556462 GNA14O95837 355 aa11.9□□□□□ -0.5
LINC01550-206ENST00000556462 NR3C1P04150 777 aa11.9□□□□□ -0.5
LINC01550-206ENST00000556462 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
LINC01550-206ENST00000556462 INSRRP14616 1297 aa11.9□□□□□ -0.5
LINC01550-206ENST00000556462 MTIF2P46199 727 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms