RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ANKEF1Q9NU02 776 aa12.88□□□□□ -0.35
SLIRP-206ENST00000556375 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-206ENST00000556375 ST3GAL5Q9UNP4 418 aa12.88□□□□□ -0.35
SLIRP-206ENST00000556375 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
SLIRP-206ENST00000556375 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
SLIRP-206ENST00000556375 FNDC1Q4ZHG4 1894 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-206ENST00000556375 MGEA5O60502 916 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 SPATA31C1P0DKV0 1188 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 PDCP20941 246 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 TECP42680 631 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 ERVK-21P61565 698 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 PTGDRQ13258 359 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 EMC2Q15006 297 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 HAUS3Q68CZ6 603 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 SPRED2Q7Z698 418 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 RTN4RL1Q86UN2 441 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-206ENST00000556375 ARNTL2Q8WYA1 636 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
SLIRP-206ENST00000556375 CCDC43Q96MW1 224 aaKnown RBP12.87□□□□□ -0.35
SLIRP-206ENST00000556375 TGS1Q96RS0 853 aaKnown RBP12.87□□□□□ -0.35
SLIRP-206ENST00000556375 POLR3CQ9BUI4 534 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-206ENST00000556375 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 COL4A3BPQ9Y5P4 624 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
SLIRP-206ENST00000556375 DENND3A2RUS2 1198 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 EPOPA6NHQ4 379 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 ZBTB39O15060 712 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 MED24O75448 989 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 STAG3L1P0CL83 205 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 RPA1P27694 616 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 PRPHP41219 470 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 SARSP49591 514 aaKnown RBP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 RARRES1P49788 294 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 DSC3Q14574 896 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 BRAPQ7Z569 592 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 CATSPER3Q86XQ3 398 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 IGSF22Q8N9C0 903 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 SNX21Q969T3 373 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 ZNF668Q96K58 619 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 SAMD11Q96NU1 681 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 MTRQ99707 1265 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 ADAM2Q99965 735 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 GCOM2Q9BZD3 368 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 RAB34Q9BZG1 259 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 RGS18Q9NS28 235 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 PRRC2BQ5JSZ5 2229 aaKnown RBP12.86□□□□□ -0.35
SLIRP-206ENST00000556375 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
SLIRP-206ENST00000556375 A0A087WZ62 844 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 VPS37CA5D8V6 355 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-206ENST00000556375 C9IYK1 514 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 DGAT1O75907 488 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 DGKIO75912 1065 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 MUTP22033 750 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
SLIRP-206ENST00000556375 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-206ENST00000556375 PDIA5Q14554 519 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 SLC24A5Q71RS6 500 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 PIGOQ8TEQ8 1089 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 TMEM143Q96AN5 459 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 ZNF689Q96CS4 500 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-206ENST00000556375 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 FDXACB1Q9BRP7 624 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-206ENST00000556375 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-206ENST00000556375 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 XPNPEP1Q9NQW7 623 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
SLIRP-206ENST00000556375 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
SLIRP-206ENST00000556375 REV3LO60673 3130 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-206ENST00000556375 IGFBP4P22692 258 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
SLIRP-206ENST00000556375 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 DTHD1Q6ZMT9 781 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 FERMT3Q86UX7 667 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 KSR1Q8IVT5 923 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 CMTR2Q8IYT2 770 aaKnown RBP12.84□□□□□ -0.35
SLIRP-206ENST00000556375 FIBCD1Q8N539 461 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 GDPD5Q8WTR4 605 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 PRPF31Q8WWY3 499 aaKnown RBP12.84□□□□□ -0.35
SLIRP-206ENST00000556375 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 C17orf80Q9BSJ5 609 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 IFT122Q9HBG6 1241 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 MTUS1Q9ULD2 1270 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 LRFN2Q9ULH4 789 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 ATG2AQ2TAZ0 1938 aa12.84□□□□□ -0.35
SLIRP-206ENST00000556375 RFXAPO00287 272 aa12.83□□□□□ -0.36
SLIRP-206ENST00000556375 ASAP2O43150 1006 aa12.83□□□□□ -0.36
SLIRP-206ENST00000556375 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms