RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 MIGA2Q7L4E1 593 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 LUZP1Q86V48 1076 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 TEX2Q8IWB9 1127 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 IQUBQ8NA54 791 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 CHURC1Q8WUH1 139 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 TRIM43Q96BQ3 446 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 DMRTB1Q96MA1 342 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 PARK7Q99497 189 aaKnown RBP7.65□□□□□ -1.18
SLIRP-204ENST00000555890 BPIFA3Q9BQP9 254 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 AMNQ9BXJ7 453 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 PSTPIP2Q9H939 334 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 SERTAD1Q9UHV2 236 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 MAP4K5Q9Y4K4 846 aa7.65□□□□□ -1.18
SLIRP-204ENST00000555890 FRYLO94915 3013 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.64□□□□□ -1.19
SLIRP-204ENST00000555890 DCDC2BA2VCK2 349 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 GOLGA6L6A8MZA4 724 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 ERVH48-1M5A8F1 160 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 CXCL11O14625 94 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 ADAMTS3O15072 1205 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 CCNT1O60563 726 aaKnown RBP7.64□□□□□ -1.19
SLIRP-204ENST00000555890 SLFN14P0C7P3 912 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 CDK11BP21127 795 aaKnown RBP7.64□□□□□ -1.19
SLIRP-204ENST00000555890 GDF10P55107 478 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 SH3BP2P78314 561 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PLCB3Q01970 1234 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PNOCQ13519 176 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 DSC3Q14574 896 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 RRP1BQ14684 758 aaKnown RBP7.64□□□□□ -1.19
SLIRP-204ENST00000555890 IQCB1Q15051 598 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 POSTNQ15063 836 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 QRICH1Q2TAL8 776 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 NOL9Q5SY16 702 aaKnown RBP7.64□□□□□ -1.19
SLIRP-204ENST00000555890 DCAF15Q66K64 600 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 FAM160B2Q86V87 743 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 FBXO11Q86XK2 927 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PDILTQ8N807 584 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 C4orf32Q8N8J7 132 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 TRIML1Q8N9V2 468 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 TBCKQ8TEA7 893 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 TRIB2Q92519 343 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 SMARCE1Q969G3 411 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 DHX58Q96C10 678 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 EPSTI1Q96J88 318 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 AK8Q96MA6 479 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 RAB34Q9BZG1 259 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 SEMA4AQ9H3S1 761 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PDLIM7Q9NR12 457 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 FAM50BQ9Y247 325 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 FCF1Q9Y324 198 aaKnown RBP7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PCDHA1Q9Y5I3 950 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PRRC2BQ5JSZ5 2229 aaKnown RBP7.64□□□□□ -1.19
SLIRP-204ENST00000555890 MYH7BA7E2Y1 1941 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 PHIPQ8WWQ0 1821 aa7.64□□□□□ -1.19
SLIRP-204ENST00000555890 KALRNO60229 2985 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 A0A0G2JLL6 359 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 A0A1W2PRG0 241 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 PHF20L1A8MW92 1017 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 BIN1O00499 593 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 WNT7AO00755 349 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 MARCH6O60337 910 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 NEMFO60524 1076 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 CTNND1O60716 968 aaKnown RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 PLA2G6O60733 806 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 PPP1R11O60927 126 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 FOSP01100 380 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 OR52Z1P0C646 297 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 GCFC2P16383 781 aaKnown RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 KCNA5P22460 613 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 UBA7P41226 1012 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 CCR10P46092 362 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 STAT2P52630 851 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 EPHA4P54764 986 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 JAG1P78504 1218 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 AP3B2Q13367 1082 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 TMEM266Q2M3C6 531 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 SHROOM1Q2M3G4 852 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 CT47A1Q5JQC4 288 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 INTS6LQ5JSJ4 861 aaKnown RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 C11orf57Q6ZUT1 292 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 USP49Q70CQ1 688 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 PRRT2Q7Z6L0 340 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 ADHFE1Q8IWW8 467 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 RASSF8Q8NHQ8 419 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 ERCC4Q92889 916 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 NUP88Q99567 741 aaPredicted RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 FEZ1Q99689 392 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 RTKNQ9BST9 563 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 LSM14BQ9BX40 385 aaKnown RBP7.63□□□□□ -1.19
SLIRP-204ENST00000555890 ZNF341Q9BYN7 854 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 PRKD2Q9BZL6 878 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 TRIM5Q9C035 493 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 VCPKMTQ9H867 229 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 IL21Q9HBE4 155 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 TMEM260Q9NX78 707 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 FEM1BQ9UK73 627 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 PRR12Q9ULL5 1215 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 SLC45A1Q9Y2W3 748 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 PCDHA5Q9Y5H7 936 aa7.63□□□□□ -1.19
SLIRP-204ENST00000555890 C2CD3Q4AC94 2353 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms