RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SPATA20Q8TB22 786 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 PPP1R13LQ8WUF5 828 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 IFT74Q96LB3 600 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 REEP2Q9BRK0 252 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 NTPCRQ9BSD7 190 aaKnown RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 BLZF1Q9H2G9 400 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 PARVGQ9HBI0 331 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 LARSQ9P2J5 1176 aaKnown RBP13.81□□□□□ -0.2
SHMT2-221ENST00000555773 SEL1LQ9UBV2 794 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 SCN10AQ9Y5Y9 1956 aa13.81□□□□□ -0.2
SHMT2-221ENST00000555773 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-221ENST00000555773 NPHP3-ACAD11A0A0J9YXS1 232 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 FRMD3A2A2Y4 597 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 CAND2O75155 1236 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 FAM13AO94988 1023 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 CD4P01730 458 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 RPN1P04843 607 aaKnown RBP13.8□□□□□ -0.2
SHMT2-221ENST00000555773 PLS3P13797 630 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 IDEP14735 1019 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 SCP2P22307 547 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 ATN1P54259 1190 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-221ENST00000555773 POU5F1BQ06416 359 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 RAD51AP2Q09MP3 1159 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 MAPK7Q13164 816 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 CAMK4Q16566 473 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 FAM126BQ8IXS8 530 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 DAW1Q8N136 415 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 LRRC71Q8N4P6 559 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 SLC17A8Q8NDX2 589 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 SPIRE2Q8WWL2 714 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 PRPF31Q8WWY3 499 aaKnown RBP13.8□□□□□ -0.2
SHMT2-221ENST00000555773 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 CTAGE1Q96RT6 745 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 TRPV6Q9H1D0 765 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
SHMT2-221ENST00000555773 PANK4Q9NVE7 773 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 RMND1Q9NWS8 449 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 PCDHA5Q9Y5H7 936 aa13.8□□□□□ -0.2
SHMT2-221ENST00000555773 CCDC85CA6NKD9 419 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 B4GALT4O60513 344 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-221ENST00000555773 MAPTP10636 758 aaKnown RBP13.79□□□□□ -0.2
SHMT2-221ENST00000555773 SARSP49591 514 aaKnown RBP13.79□□□□□ -0.2
SHMT2-221ENST00000555773 CLCN3P51790 818 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 SMTNP53814 917 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 LAMTOR4Q0VGL1 99 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 PSMD2Q13200 908 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 PNOCQ13519 176 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 TFDP1Q14186 410 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 KCNB1Q14721 858 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 HERC4Q5GLZ8 1057 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-221ENST00000555773 RUFY4Q6ZNE9 571 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 MYCT1Q8N699 235 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 DNAJB3Q8WWF6 145 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 ZBTB10Q96DT7 871 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 POLR3FQ9H1D9 316 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-221ENST00000555773 GPRC5CQ9NQ84 441 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
SHMT2-221ENST00000555773 MYH9P35579 1960 aaKnown RBP13.79□□□□□ -0.2
SHMT2-221ENST00000555773 SFI1A8K8P3 1242 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 H0YCG3 227 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 KLRC4O43908 158 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 RHOBTB3O94955 611 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 GLRA2P23416 452 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 CASP1P29466 404 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 ABCD1P33897 745 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 NAMPTP43490 491 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 SOX10P56693 466 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-221ENST00000555773 TLE2Q04725 743 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 RBL2Q08999 1139 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 DMP1Q13316 513 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-221ENST00000555773 DRP2Q13474 957 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 BFSP2Q13515 415 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 TRIM60Q495X7 471 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
SHMT2-221ENST00000555773 RBM43Q6ZSC3 357 aaKnown RBP13.78□□□□□ -0.2
SHMT2-221ENST00000555773 ZNF410Q86VK4 478 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 CCDC155Q8N6L0 562 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 CAGE1Q8TC20 777 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 KCNN1Q92952 543 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 FAM49AQ9H0Q0 323 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-221ENST00000555773 ZHX3Q9H4I2 956 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 EXOC1Q9NV70 894 aa13.78□□□□□ -0.2
SHMT2-221ENST00000555773 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms