RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 CHST13Q8NET6 341 aa17.52■□□□□ 0.39
PPP4R3A-205ENST00000554684 WDR24Q96S15 920 aa17.52■□□□□ 0.39
PPP4R3A-205ENST00000554684 SEC31AO94979 1220 aaKnown RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 HOXD10P28358 340 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 TCF7P36402 384 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 ACTR2P61160 394 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 ALKBH5Q6P6C2 394 aaKnown RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 UBLCP1Q8WVY7 318 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 UNC45AQ9H3U1 944 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 CYP2C19P33261 490 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 COPB2P35606 906 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 PRAMEF19Q5SWL8 479 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 KBTBD4Q9NVX7 518 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 SRGAP2O75044 1071 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 SERPING1P05155 500 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 CAPN2P17655 700 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 RPA1P27694 616 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 KLK7P49862 253 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 PDE6CP51160 858 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 PSMC6P62333 389 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 GFPT1Q06210 699 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 NACA2Q9H009 215 aa17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 DDX41Q9UJV9 622 aaKnown RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 BZW2Q9Y6E2 419 aaKnown RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 TRPM3Q9HCF6 1732 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-205ENST00000554684 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 PPFIA1Q13136 1202 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 MED10Q9BTT4 135 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 PCDHB4Q9Y5E5 795 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 ZEB2O60315 1214 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 GYPCP04921 128 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 MYBP10242 640 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.399e-9■□□□□ 9.1
PPP4R3A-205ENST00000554684 CALCOCO2Q13137 446 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 MESDQ14696 234 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 MOV10L1Q9BXT6 1211 aaKnown RBP17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 ZNF233A6NK53 670 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 GBP2P32456 591 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 GABPAQ06546 454 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 LONRF2Q1L5Z9 754 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 RAD9BQ6WBX8 426 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 IFT20Q8IY31 132 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 NAP1L3Q99457 506 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 PPP2R3BQ9Y5P8 575 aa17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
PPP4R3A-205ENST00000554684 TBX3O15119 743 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 GUCY2FP51841 1108 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 ATN1P54259 1190 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 XXYLT1Q8NBI6 393 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 KRIT1O00522 736 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 OPA1O60313 960 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 PLEKHH3Q7Z736 793 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 MSANTD4Q8NCY6 345 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 RABGGTAQ92696 567 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 DNAJC12Q9UKB3 198 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 RIPK3Q9Y572 518 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 DOT1LQ8TEK3 1739 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 PPATQ06203 517 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 CCDC155Q8N6L0 562 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 CXCL11O14625 94 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 MYZAPP0CAP1 466 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 ADORA2AP29274 412 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 SREBF2Q12772 1141 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 XKR3Q5GH77 459 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 SCYL2Q6P3W7 929 aa17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 ELOA2Q8IYF1 753 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 SUCLA2Q9P2R7 463 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3A-205ENST00000554684 LRRC37A3O60309 1634 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 A0A1W2PQC6 194 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 FGRP09769 529 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 CLCN3P51790 818 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 AFG1LQ8WV93 481 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 PFASO15067 1338 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 MFAP3P55082 362 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 TNFAIP2Q03169 654 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 CYP4F22Q6NT55 531 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 CCDC105Q8IYK2 499 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 RPGRIP1Q96KN7 1286 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 RPF1Q9H9Y2 349 aaKnown RBP17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 PXMP2Q9NR77 195 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 PRKAG2Q9UGJ0 569 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 LRFN2Q9ULH4 789 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 TCHHQ07283 1943 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 CYP11B2P19099 503 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 SREBF1P36956 1147 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 TRAPPC12Q8WVT3 735 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 COPS5Q92905 334 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 FAM149B1Q96BN6 582 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 FAM167AQ96KS9 214 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 CAPN11Q9UMQ6 739 aa17.48■□□□□ 0.39
PPP4R3A-205ENST00000554684 GOLGA8SH3BPF8 625 aa17.47■□□□□ 0.39
PPP4R3A-205ENST00000554684 BMP6P22004 513 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms