RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 KHDRBS2Q5VWX1 349 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 C16orf86Q6ZW13 317 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PEX26Q7Z412 305 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ARHGEF3Q9NR81 526 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 DBR1Q9UK59 544 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TIMM13Q9Y5L4 95 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 MRFAP1Q9Y605 127 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PSMD9O00233 223 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 NCK2O43639 380 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SEMG2Q02383 582 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 E2F4Q16254 413 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SYTL3Q4VX76 610 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 FRA10AC1Q70Z53 315 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CEP70Q8NHQ1 597 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 LRRC4Q9HBW1 653 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 APPL1Q9UKG1 709 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PCDHA1Q9Y5I3 950 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TPD52L2O43399 206 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 C6orf222P0C671 652 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 FLT3P36888 993 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SMTNP53814 917 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF211Q13398 564 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 WHAMMP3Q1A5X7 153 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PTPN20Q4JDL3 420 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ANGEL2Q5VTE6 544 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 USP17L2Q6R6M4 530 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 EXOC8Q8IYI6 725 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TP53INP1Q96A56 240 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PKN3Q6P5Z2 889 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 RMDN1Q96DB5 314 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 FHDC1Q9C0D6 1143 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ELL3Q9HB65 397 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SMPD4Q9NXE4 827 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 GRM8O00222 908 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 E2F6O75461 281 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PLS3P13797 630 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 EEF1GP26641 437 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 VAV2P52735 878 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TJAP1Q5JTD0 557 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 R3HCC1LQ7Z5L2 792 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 FBXO18Q8NFZ0 1043 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TNRQ92752 1358 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 DENND3A2RUS2 1198 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ADM5C9JUS6 153 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TTC4O95801 387 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CCR4P51679 360 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 MCCD1P59942 119 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TUBB4BP68371 445 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 THOC5Q13769 683 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CREB3L3Q68CJ9 461 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 IQSEC1Q6DN90 963 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TWF2Q6IBS0 349 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 KLF6Q99612 283 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 EPAS1Q99814 870 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 DACT1Q9NYF0 836 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SLAIN2Q9P270 581 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 UNC13CQ8NB66 2214 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SEMA3EO15041 775 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 GH2P01242 217 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 NFICP08651 508 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 EVCP57679 992 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC26Q8TAB7 109 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 APOL2Q9BQE5 337 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CACNG4Q9UBN1 327 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 RLBP1P12271 317 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PTH1RQ03431 593 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 DDIASQ8IXT1 998 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TMTC2Q8N394 836 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 VTI1BQ9UEU0 232 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SOS1Q07889 1333 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ZC3H4Q9UPT8 1303 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 NDUFAB1O14561 156 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 NUDT14O95848 222 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CPP00450 1065 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CLTAP09496 248 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PLCG2P16885 1265 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 RPS7P62081 194 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 KRT83P78385 493 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 HLFQ16534 295 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 FOXR2Q6PJQ5 311 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ARHGEF18Q6ZSZ5 1173 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ARFGAP2Q8N6H7 521 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 KIFAP3Q92845 792 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 GAL3ST1Q99999 423 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 POLR3CQ9BUI4 534 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 BBS2Q9BXC9 721 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 YEATS2Q9ULM3 1422 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 STRIP2Q9ULQ0 834 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 LRRD1A4D1F6 860 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ABCB1P08183 1280 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CEBPGP53567 150 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ICA1Q05084 483 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PLVAPQ9BX97 442 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ASPNQ9BXN1 380 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SYNJ2O15056 1496 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ADGRL1O94910 1474 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TTLL13PA6NNM8 815 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 HUNKP57058 714 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PRSS58Q8IYP2 241 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 JSRP1Q96MG2 331 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms