RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ZNF473Q8WTR7 871 aaKnown RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 GMCL1Q96IK5 515 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 HSD17B14Q9BPX1 270 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 POLR3CQ9BUI4 534 aaPredicted RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 DPH5Q9H2P9 285 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 PI4KBQ9UBF8 816 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 TISP43B9A030 160 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 BACH1O14867 736 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 FAM13AO94988 1023 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 BMP3P12645 472 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 SOX5P35711 763 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZNF76P36508 570 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 POU5F1Q01860 360 aaKnown RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZNF211Q13398 564 aaPredicted RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 CUL1Q13616 776 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 DACT2Q5SW24 774 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 UBAP2Q5T6F2 1119 aaKnown RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 AADACL2Q6P093 401 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 OTOP1Q7RTM1 612 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 MYCBPAPQ8TBZ2 947 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 CALR3Q96L12 384 aaKnown RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 IDI2Q9BXS1 227 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 TRIM31Q9BZY9 425 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 FAM107BQ9H098 131 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 EPN3Q9H201 632 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 TDRD3Q9H7E2 651 aaKnown RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 METTL14Q9HCE5 456 aaKnown RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 SUCLA2Q9P2R7 463 aaPredicted RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZNF219Q9P2Y4 722 aaPredicted RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 CNOT8Q9UFF9 292 aaKnown RBP7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 DNAJC12Q9UKB3 198 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 COG5Q9UP83 839 aa7.54□□□□□ -1.2
LINC-ROR-201ENST00000553704 ATP8B3O60423 1300 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 A0A0A6YYK5 440 aaPredicted RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 GTPBP10A4D1E9 387 aaKnown RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 HMGB1P1B2RPK0 211 aaPredicted RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 G3V3G9 751 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 PSMD10O75832 226 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 CLSTN1O94985 981 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 CFBP00751 764 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 FGGP02679 453 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 CYP3A4P08684 503 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 NPR1P16066 1061 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 FERP16591 822 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 RPL13P26373 211 aaKnown RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 CTNNA1P35221 906 aaKnown RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 MDH1P40925 334 aaKnown RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 STAT1P42224 750 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 MARCKSL1P49006 195 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 DCAF8Q5TAQ9 597 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 EMC10Q5UCC4 262 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 LRCH2Q5VUJ6 765 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 KCNV1Q6PIU1 500 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 TMC3Q7Z5M5 1100 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 NLRP14Q86W24 1093 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 SLC35G2Q8TBE7 412 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 SLC20A1Q8WUM9 679 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 UBLCP1Q8WVY7 318 aaPredicted RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 INTS2Q9H0H0 1204 aaKnown RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 THAP2Q9H0W7 228 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 AGPAT3Q9NRZ7 376 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 SLC12A6Q9UHW9 1150 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 EIF3DO15371 548 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 ECE2O60344 883 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 ERLIN2O94905 339 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 TRIM37O94972 964 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 FOSP01100 380 aaPredicted RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 TMOD1P28289 359 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 PSMC2P35998 433 aaKnown RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 DLG4P78352 724 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 PPATQ06203 517 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 PLS1Q14651 629 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 CCDC174Q6PII3 467 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 ZSWIM2Q8NEG5 633 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 ACER1Q8TDN7 264 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 RFFLQ8WZ73 363 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 ALG3Q92685 438 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 PARVGQ9HBI0 331 aa7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 CHORDC1Q9UHD1 332 aaPredicted RBP7.53□□□□□ -1.2
LINC-ROR-201ENST00000553704 AFF2P51816 1311 aa7.52□□□□□ -1.2
LINC-ROR-201ENST00000553704 LOXHD1Q8IVV2 1947 aa7.52□□□□□ -1.2
LINC-ROR-201ENST00000553704 CCDC188H7C350 402 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 ARP10275 920 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 GAP43P17677 238 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 ANXA13P27216 316 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 INPP5BP32019 993 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 MYL7Q01449 175 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 MAPK7Q13164 816 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 SLC15A2Q16348 729 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 SPRED3Q2MJR0 410 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 CHADLQ6NUI6 762 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 BTNL9Q6UXG8 535 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 LRIG3Q6UXM1 1119 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 VPS36Q86VN1 386 aa7.52□□□□□ -1.21
LINC-ROR-201ENST00000553704 CPNE8Q86YQ8 564 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms