RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ADAM17P78536 824 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 PRKCEQ02156 737 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 TBC1D8BQ0IIM8 1120 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 NFX1Q12986 1120 aaKnown RBP6.62□□□□□ -1.35
CCDC65-204ENST00000552188 PAK2Q13177 524 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 EPHA7Q15375 998 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 MTERF2Q49AM1 385 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 PLEKHG4Q58EX7 1191 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 XKR3Q5GH77 459 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 MARCH8Q5T0T0 291 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 RASIP1Q5U651 963 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 EFCAB12Q6NXP0 572 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 OTUD6AQ7L8S5 288 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 HERC6Q8IVU3 1022 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 EXOC8Q8IYI6 725 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 USP38Q8NB14 1042 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 BANK1Q8NDB2 785 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 FBXO18Q8NFZ0 1043 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 ETNPPLQ8TBG4 499 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 MBOAT7Q96N66 472 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 JPH2Q9BR39 696 aaPredicted RBP6.62□□□□□ -1.35
CCDC65-204ENST00000552188 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 CELF4Q9BZC1 486 aaKnown RBP6.62□□□□□ -1.35
CCDC65-204ENST00000552188 FOXP1Q9H334 677 aaPredicted RBP6.62□□□□□ -1.35
CCDC65-204ENST00000552188 KCNMB3Q9NPA1 279 aa6.62□□□□□ -1.35
CCDC65-204ENST00000552188 MBLAC1A4D2B0 266 aaPredicted RBP6.61□□□□□ -1.35
CCDC65-204ENST00000552188 EDIL3O43854 480 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 CHRNA1P02708 482 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 FOSL2P15408 326 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 CD46P15529 392 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 ATP4AP20648 1035 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 IGFBP4P22692 258 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 POLGP54098 1239 aaPredicted RBP6.61□□□□□ -1.35
CCDC65-204ENST00000552188 DEFB103AP81534 67 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 ST3GAL1Q11201 340 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 PPP2R5CQ13362 524 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 MBTPS1Q14703 1052 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 ZNF174Q15697 407 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 TMEM266Q2M3C6 531 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 EARS2Q5JPH6 523 aaKnown RBP6.61□□□□□ -1.35
CCDC65-204ENST00000552188 FBXO47Q5MNV8 452 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 TTC38Q5R3I4 469 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
CCDC65-204ENST00000552188 THSD4Q6ZMP0 1018 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCDC65-204ENST00000552188 TSHZ1Q6ZSZ6 1077 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 RPAINQ86UA6 219 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 NOSTRINQ8IVI9 506 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 TPH2Q8IWU9 490 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 ERMNQ8TAM6 284 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 MYLIPQ8WY64 445 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 ZBTB10Q96DT7 871 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 DYDC2Q96IM9 177 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 PPP1R16BQ96T49 567 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 CDX2Q99626 313 aaPredicted RBP6.61□□□□□ -1.35
CCDC65-204ENST00000552188 FTHL17Q9BXU8 183 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 TTC12Q9H892 705 aaPredicted RBP6.61□□□□□ -1.35
CCDC65-204ENST00000552188 LRFN2Q9ULH4 789 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 SQORQ9Y6N5 450 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 MYO9BQ13459 2157 aa6.61□□□□□ -1.35
CCDC65-204ENST00000552188 MYH15Q9Y2K3 1946 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 FNDC1Q4ZHG4 1894 aaPredicted RBP6.6□□□□□ -1.35
CCDC65-204ENST00000552188 KIAA1671Q9BY89 1806 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 DENND3A2RUS2 1198 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 GPR182O15218 404 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 ZNF862O60290 1169 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 GJB5O95377 273 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 C22orf31O95567 290 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 VTNP04004 478 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 CA3P07451 260 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 HSP90AA1P07900 732 aaKnown RBP6.6□□□□□ -1.35
CCDC65-204ENST00000552188 CFHP08603 1231 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 STAG3L1P0CL83 205 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 MYOGP15173 224 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 ZSCAN20P17040 1043 aaPredicted RBP6.6□□□□□ -1.35
CCDC65-204ENST00000552188 CD52P31358 61 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 TRAPPC10P48553 1259 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 CLCN3P51790 818 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 CRYBB1P53674 252 aaPredicted RBP6.6□□□□□ -1.35
CCDC65-204ENST00000552188 NLRP11P59045 1033 aaKnown RBP6.6□□□□□ -1.35
CCDC65-204ENST00000552188 CDC42EP1Q00587 391 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 CYP4A11Q02928 519 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 MGAT3Q09327 533 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 ORC2Q13416 577 aaPredicted RBP6.6□□□□□ -1.35
CCDC65-204ENST00000552188 LPIN1Q14693 890 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 GPNMBQ14956 572 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 GRIN2CQ14957 1233 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 UGCGQ16739 394 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 KIZQ2M2Z5 673 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 XKR9Q5GH70 373 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 TRAF7Q6Q0C0 670 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 TMCO2Q7Z6W1 182 aaPredicted RBP6.6□□□□□ -1.35
CCDC65-204ENST00000552188 KIAA0319LQ8IZA0 1049 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 LRRC71Q8N4P6 559 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 NEK9Q8TD19 979 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 TCP11Q8WWU5 503 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 SLC7A3Q8WY07 619 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 PPM1EQ8WY54 764 aa6.6□□□□□ -1.35
CCDC65-204ENST00000552188 ARNTL2Q8WYA1 636 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms