RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 GLG1Q92896 1179 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 SECISBP2LQ93073 1101 aaKnown RBP11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 MTMR8Q96EF0 704 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 SFXN1Q9H9B4 322 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 SLC2A4RGQ9NR83 387 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 C1orf112Q9NSG2 853 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 LAMA1P25391 3075 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 DENND3A2RUS2 1198 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 ANHXE9PGG2 379 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 FIBPO43427 364 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 KCNA2P16389 499 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 CD72P21854 359 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 METAP2P50579 478 aaKnown RBP eCLIP11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 GPC5P78333 572 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 PLCB4Q15147 1175 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 UNQ6494/PRO21346Q6UXR6 183 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 FAM228AQ86W67 206 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 ELAC1Q9H777 363 aaKnown RBP11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 ERAP1Q9NZ08 941 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 GINS2Q9Y248 185 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 F5P12259 2224 aa11.8□□□□□ -0.52
SLC48A1-209ENST00000552003 KANSL1LA0AUZ9 987 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 SHISA7A6NL88 538 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 SRRM3A6NNA2 597 aaPredicted RBP11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 FGAP02671 866 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 CTSAP10619 480 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 CLCN4P51793 760 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 BCAR1P56945 870 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 HAND2P61296 217 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 FZD5Q13467 585 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 SNW1Q13573 536 aaKnown RBP11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 HTR4Q13639 388 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 PRR23CQ6ZRP0 262 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 LRRC43Q8N309 656 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 KLHL5Q96PQ7 755 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 SENP7Q9BQF6 1050 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 SEMA4GQ9NTN9 838 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 GMEB2Q9UKD1 530 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 WASF3Q9UPY6 502 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 CELSR3Q9NYQ7 3312 aa11.79□□□□□ -0.52
SLC48A1-209ENST00000552003 SMIM35A0A1B0GVV1 85 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 RRN3P2A6NIE6 340 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 M0QZ92 97 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 TAF4O00268 1085 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 LILRB3O75022 631 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 MYBP10242 640 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 ALX1Q15699 326 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 GNPTABQ3T906 1256 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 C15orf39Q6ZRI6 1047 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 KIAA0319LQ8IZA0 1049 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 PPP1R16BQ96T49 567 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 BCO2Q9BYV7 579 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 LRRCC1Q9C099 1032 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 PRMT8Q9NR22 394 aaPredicted RBP11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 NUMBLQ9Y6R0 609 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 NEDD4P46934 1319 aa11.78□□□□□ -0.52
SLC48A1-209ENST00000552003 FREM2Q5SZK8 3169 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 FAM170BA6NMN3 283 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 DHX16O60231 1041 aaKnown RBP11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 B4GALT3O60512 393 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 RFPL2O75678 378 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 CNPP09543 421 aaKnown RBP11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 POLR2MP0CAP2 368 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 LAMP2P13473 410 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 MTHFD1LQ6UB35 978 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 DGKHQ86XP1 1220 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 CLDN23Q96B33 292 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 ZNF707Q96C28 371 aaPredicted RBP11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 SMARCAD1Q9H4L7 1026 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 RCAN3Q9UKA8 241 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 CLUHO75153 1309 aa11.77□□□□□ -0.53
SLC48A1-209ENST00000552003 HMMRO75330 724 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 TOP3BO95985 862 aaKnown RBP11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 RETP07949 1114 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 SPINK2P20155 84 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 UBXN2BQ14CS0 331 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 CSRP2Q16527 193 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 ASPRV1Q53RT3 343 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 LAIR1Q6GTX8 287 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 DDX53Q86TM3 631 aaKnown RBP11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 ECHDC2Q86YB7 292 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 NME8Q8N427 588 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms