RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 OVCH1Q7RTY7 1134 aa6.41□□□□□ -1.38
CCDC38-208ENST00000549876 RPUSD2Q8IZ73 545 aaKnown RBP6.41□□□□□ -1.38
CCDC38-208ENST00000549876 THAP3Q8WTV1 239 aaPredicted RBP6.41□□□□□ -1.38
CCDC38-208ENST00000549876 MIEF2Q96C03 454 aa6.41□□□□□ -1.38
CCDC38-208ENST00000549876 FOXRED1Q96CU9 486 aaPredicted RBP6.41□□□□□ -1.38
CCDC38-208ENST00000549876 CRAMP1Q96RY5 1269 aa6.41□□□□□ -1.38
CCDC38-208ENST00000549876 SLC6A15Q9H2J7 730 aa6.41□□□□□ -1.38
CCDC38-208ENST00000549876 COQ6Q9Y2Z9 468 aa6.41□□□□□ -1.38
CCDC38-208ENST00000549876 KCNQ2O43526 872 aa6.4□□□□□ -1.38
CCDC38-208ENST00000549876 ALDH6A1Q02252 535 aaKnown RBP6.4□□□□□ -1.38
CCDC38-208ENST00000549876 MAP3K12Q12852 859 aa6.4□□□□□ -1.38
CCDC38-208ENST00000549876 TOB2Q14106 344 aaPredicted RBP6.4□□□□□ -1.38
CCDC38-208ENST00000549876 ACAP1Q15027 740 aa6.4□□□□□ -1.38
CCDC38-208ENST00000549876 SF3A1Q15459 793 aaKnown RBP6.4□□□□□ -1.38
CCDC38-208ENST00000549876 FGD2Q7Z6J4 655 aa6.4□□□□□ -1.38
CCDC38-208ENST00000549876 RTN4RL1Q86UN2 441 aaPredicted RBP6.4□□□□□ -1.38
CCDC38-208ENST00000549876 ZSWIM2Q8NEG5 633 aa6.4□□□□□ -1.38
CCDC38-208ENST00000549876 SLC7A6OSQ96CW6 309 aaPredicted RBP6.4□□□□□ -1.38
CCDC38-208ENST00000549876 GPHA2Q96T91 129 aa6.4□□□□□ -1.38
CCDC38-208ENST00000549876 TTPALQ9BTX7 342 aa6.4□□□□□ -1.38
CCDC38-208ENST00000549876 CCDC163A0A0D9SF12 145 aa6.39□□□□□ -1.39
CCDC38-208ENST00000549876 SESN2P58004 480 aaPredicted RBP6.39□□□□□ -1.39
CCDC38-208ENST00000549876 C2orf27AQ580R0 203 aa6.39□□□□□ -1.39
CCDC38-208ENST00000549876 ABHD17CQ6PCB6 329 aa6.39□□□□□ -1.39
CCDC38-208ENST00000549876 MAGEB10Q96LZ2 347 aaPredicted RBP6.39□□□□□ -1.39
CCDC38-208ENST00000549876 MRPL4Q9BYD3 311 aaKnown RBP6.39□□□□□ -1.39
CCDC38-208ENST00000549876 PTCH2Q9Y6C5 1203 aa6.39□□□□□ -1.39
CCDC38-208ENST00000549876 SLC12A8A0AV02 714 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 C2orf78A6NCI8 922 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 H2AFYO75367 372 aaKnown RBP6.38□□□□□ -1.39
CCDC38-208ENST00000549876 MAN2A2P49641 1150 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 TMEM132BQ14DG7 1078 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 BRAPQ7Z569 592 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 GFM2Q969S9 779 aaKnown RBP6.38□□□□□ -1.39
CCDC38-208ENST00000549876 DNAJC2Q99543 621 aaKnown RBP6.38□□□□□ -1.39
CCDC38-208ENST00000549876 FOXB1Q99853 325 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 TRIM39Q9HCM9 518 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 SFMBT1Q9UHJ3 866 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 TNFRSF18Q9Y5U5 241 aa6.38□□□□□ -1.39
CCDC38-208ENST00000549876 XDHP47989 1333 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 TCRBV16S1A1N1A0A5B0 115 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 TMEM191CA6NGB0 347 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 TRAF5O00463 557 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 ZBTB48P10074 688 aaPredicted RBP6.37□□□□□ -1.39
CCDC38-208ENST00000549876 CNGB1Q14028 1251 aaPredicted RBP6.37□□□□□ -1.39
CCDC38-208ENST00000549876 LAIR1Q6GTX8 287 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 ZNF662Q6ZS27 426 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 GAREM2Q75VX8 874 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 MRGPREQ86SM8 312 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 RPL10LQ96L21 214 aaKnown RBP6.37□□□□□ -1.39
CCDC38-208ENST00000549876 OSBPL2Q9H1P3 480 aa6.37□□□□□ -1.39
CCDC38-208ENST00000549876 NCOA5Q9HCD5 579 aaKnown RBP6.37□□□□□ -1.39
CCDC38-208ENST00000549876 SAE1Q9UBE0 346 aaPredicted RBP6.37□□□□□ -1.39
CCDC38-208ENST00000549876 CDK11AQ9UQ88 783 aaPredicted RBP6.37□□□□□ -1.39
CCDC38-208ENST00000549876 RPS6KA4O75676 772 aa6.36□□□□□ -1.39
CCDC38-208ENST00000549876 ANTXR2P58335 489 aa6.36□□□□□ -1.39
CCDC38-208ENST00000549876 DPY19L2P1Q6NXN4 242 aa6.36□□□□□ -1.39
CCDC38-208ENST00000549876 FAM111BQ6SJ93 734 aa6.36□□□□□ -1.39
CCDC38-208ENST00000549876 ANKRD53Q8N9V6 530 aa6.36□□□□□ -1.39
CCDC38-208ENST00000549876 NKD2Q969F2 451 aaPredicted RBP6.36□□□□□ -1.39
CCDC38-208ENST00000549876 MAGEL2Q9UJ55 1249 aa6.36□□□□□ -1.39
CCDC38-208ENST00000549876 DENND2AQ9ULE3 1009 aa6.36□□□□□ -1.39
CCDC38-208ENST00000549876 KLRG2A4D1S0 409 aaPredicted RBP6.35□□□□□ -1.39
CCDC38-208ENST00000549876 PROZP22891 400 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 ADRA1BP35368 520 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 RABGGTBP53611 331 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 BPIFB4P59827 614 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 ELAVL1Q15717 326 aaKnown RBP6.35□□□□□ -1.39
CCDC38-208ENST00000549876 CC2D1AQ6P1N0 951 aaPredicted RBP6.35□□□□□ -1.39
CCDC38-208ENST00000549876 HTR3DQ70Z44 454 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 RHOUQ7L0Q8 258 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 GSPT2Q8IYD1 628 aaKnown RBP6.35□□□□□ -1.39
CCDC38-208ENST00000549876 IGSF22Q8N9C0 903 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 ERCC4Q92889 916 aaPredicted RBP6.35□□□□□ -1.39
CCDC38-208ENST00000549876 CLUHP3Q96NS8 147 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 NRDE2Q9H7Z3 1164 aa6.35□□□□□ -1.39
CCDC38-208ENST00000549876 RBM8AQ9Y5S9 174 aaKnown RBP6.35□□□□□ -1.39
CCDC38-208ENST00000549876 UBE2QL1A1L167 161 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 PLD2O14939 933 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 HIP1RO75146 1068 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 NPTXRO95502 500 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 PTGS2P35354 604 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 IRF9Q00978 393 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 TCIRG1Q13488 830 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 GAGE13Q4V321 117 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 OTOP1Q7RTM1 612 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 OR5AN1Q8NGI8 311 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.39
CCDC38-208ENST00000549876 HAS1Q92839 578 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 GCDHQ92947 438 aaPredicted RBP6.34□□□□□ -1.39
CCDC38-208ENST00000549876 VOPP1Q96AW1 172 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 GPR87Q9BY21 358 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 TRPS1Q9UHF7 1281 aa6.34□□□□□ -1.39
CCDC38-208ENST00000549876 RAPGEF3O95398 923 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 PRLP01236 227 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 BMP5P22003 454 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 RGS3P49796 1198 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 HNRNPA0Q13151 305 aaKnown RBP6.33□□□□□ -1.4
CCDC38-208ENST00000549876 SQSTM1Q13501 440 aa6.33□□□□□ -1.4
CCDC38-208ENST00000549876 DGKDQ16760 1214 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms