RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SYCP3Q8IZU3 236 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 LRRC57Q8N9N7 239 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 LPAR1Q92633 364 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 STK33Q9BYT3 514 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 MYOZ2Q9NPC6 264 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 EVI5O60447 810 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 SOX5P35711 763 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 GGCXP38435 758 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 TAF3Q5VWG9 929 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 DNAAF5Q86Y56 855 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 TAF4BQ92750 862 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 INTUQ9ULD6 942 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 SCAF8Q9UPN6 1271 aaKnown RBP16.92■□□□□ 0.3
BRF1-212ENST00000547562 UBIAD1Q9Y5Z9 338 aa16.92■□□□□ 0.3
BRF1-212ENST00000547562 K7ENM7 598 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 AGPSO00116 658 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 H2AFZP0C0S5 128 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 TRIM49P0CI25 452 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 TRIM49CP0CI26 452 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 ITGB3BPQ13352 177 aaPredicted RBP16.91■□□□□ 0.3
BRF1-212ENST00000547562 MYBPC2Q14324 1141 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 RASA3Q14644 834 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 PCNX4Q63HM2 1172 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 EMBQ6PCB8 327 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 H2AFVQ71UI9 128 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 CPXCR1Q8N123 301 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 FAM204AQ9H8W3 233 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 AGO4Q9HCK5 861 aaKnown RBP16.91■□□□□ 0.3
BRF1-212ENST00000547562 DNAJC12Q9UKB3 198 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 ZHX2Q9Y6X8 837 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 A0A0A6YYK5 440 aaPredicted RBP16.91■□□□□ 0.3
BRF1-212ENST00000547562 GOLGA6BA6NDN3 693 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 EXOC3O60645 756 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 KIF4AO95239 1232 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 ALAS1P13196 640 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 MRPS9P82933 396 aaKnown RBP16.91■□□□□ 0.3
BRF1-212ENST00000547562 BFSP1Q12934 665 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 TPCN2Q8NHX9 752 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 SLC38A10Q9HBR0 1119 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 CALCOCO1Q9P1Z2 691 aa16.91■□□□□ 0.3
BRF1-212ENST00000547562 LARSQ9P2J5 1176 aaKnown RBP16.91■□□□□ 0.3
BRF1-212ENST00000547562 DBR1Q9UK59 544 aaKnown RBP16.91■□□□□ 0.3
BRF1-212ENST00000547562 MYL7Q01449 175 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 DRAP1Q14919 205 aaPredicted RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 IFT20Q8IY31 132 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 SLC30A5Q8TAD4 765 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 SYTL5Q8TDW5 730 aaPredicted RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 U2AF1L4Q8WU68 220 aaKnown RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 RIN2Q8WYP3 895 aaPredicted RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 CAVIN3Q969G5 261 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 INTS2Q9H0H0 1204 aaKnown RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 KCNK3O14649 394 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 GLI1P08151 1106 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 MAPTP10636 758 aaKnown RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 RARRES1P49788 294 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 HNRNPH2P55795 449 aaKnown RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 MTMR1Q13613 665 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 ALCAMQ13740 583 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 PLS1Q14651 629 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 MUM1L1Q5H9M0 696 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 MAEAQ7L5Y9 396 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 LNX1Q8TBB1 728 aaPredicted RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 GPR88Q9GZN0 384 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 GOLPH3Q9H4A6 298 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 RAVER2Q9HCJ3 691 aaKnown RBP16.9■□□□□ 0.3
BRF1-212ENST00000547562 GDF3Q9NR23 364 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 APEX2Q9UBZ4 518 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 SAMM50Q9Y512 469 aa16.9■□□□□ 0.3
BRF1-212ENST00000547562 QARSP47897 775 aaKnown RBP16.89■□□□□ 0.29
BRF1-212ENST00000547562 CIAPIN1Q6FI81 312 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 FMNL3Q8IVF7 1028 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 LMBR1Q8WVP7 490 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 PBKQ96KB5 322 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 TEPSINQ96N21 525 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 KRT12Q99456 494 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 TMEM206Q9H813 350 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 HOMER2Q9NSB8 354 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 MAP3K20Q9NYL2 800 aaKnown RBP16.89■□□□□ 0.29
BRF1-212ENST00000547562 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 DAAM1Q9Y4D1 1078 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 HEXIM1O94992 359 aaKnown RBP16.89■□□□□ 0.29
BRF1-212ENST00000547562 CAPN2P17655 700 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 LMNB1P20700 586 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 RNASE9P60153 205 aaKnown RBP16.89■□□□□ 0.29
BRF1-212ENST00000547562 DGKZQ13574 1117 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 SLFN11Q7Z7L1 901 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 RDH13Q8NBN7 331 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 TMEM174Q8WUU8 243 aa16.89■□□□□ 0.29
BRF1-212ENST00000547562 LYPLA2O95372 231 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 NPEPPSP55786 919 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 GLYCTKQ8IVS8 523 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 SAMD3Q8N6K7 520 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 GOLGA6L1Q8N7Z2 621 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
BRF1-212ENST00000547562 SYT11Q9BT88 431 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 844.3 ms