RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 WNT8AQ9H1J5 351 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 HAUS2Q9NVX0 235 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 FAF1Q9UNN5 650 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 KIF1CO43896 1103 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 PDIA6Q15084 440 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 CALN1Q9BXU9 219 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 ZFP69BQ9UJL9 534 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 AGTP01019 485 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 RFX1P22670 979 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 CARSP49589 748 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 AGBL2Q5U5Z8 902 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 RNF168Q8IYW5 571 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 SLC7A3Q8WY07 619 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 NUP85Q9BW27 656 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 CSF1RP07333 972 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 TNFAIP1Q13829 316 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 KCTD6Q8NC69 237 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 RBM41Q96IZ5 413 aaKnown RBP13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 AS3MTQ9HBK9 375 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 TOM1L1O75674 476 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 RFC1P35251 1148 aaPredicted RBP13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 POLD4Q9HCU8 107 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 SPATA31A3Q5VYP0 1347 aa13.1□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 H3BQF6 201 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 TTI1O43156 1089 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 HSPA9P38646 679 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ARL4CP56559 192 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 NME8Q8N427 588 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ADAM22Q9P0K1 906 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 RAD51CO43502 376 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 PFDN1O60925 122 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 SNAP25P60880 206 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 MMEL1Q495T6 779 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 TRIM59Q8IWR1 403 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 NEDD1Q8NHV4 660 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 NSMCE1Q8WV22 266 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 GOLGA8QA0A0J9YX86 632 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 GOLGA8OA6NCC3 632 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ZNF233A6NK53 670 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 GOLGA8NF8WBI6 632 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 CD44P16070 742 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 SAT1P21673 171 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 KLK7P49862 253 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 PEX3P56589 373 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 CELF1Q92879 486 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 DNAJC7Q99615 494 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 LRRIQ3A6PVS8 624 aaPredicted RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 PDXKO00764 312 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 FAM107AO95990 144 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 SETSIPP0DME0 302 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 PRELPP51888 382 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 PDE1CQ14123 709 aaPredicted RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 CYFIP2Q96F07 1278 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 SNF8Q96H20 258 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ANKRD36BP1Q96IX9 119 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 SEC16BQ96JE7 1060 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 FAM84BQ96KN1 310 aaPredicted RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 ADGRB2O60241 1585 aa13.09□□□□□ -0.31
NPC1L1-204ENST00000546276 PHF20L1A8MW92 1017 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 MED7O43513 233 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 HAUS5O94927 633 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 NAB2Q15742 525 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ST13P4Q8IZP2 240 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ABCA9Q8IUA7 1624 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 GPC4O75487 556 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 KRT37O76014 449 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 SERPINB2P05120 415 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 CHN1P15882 459 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 STAT3P40763 770 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 PTGISQ16647 500 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ANKRD20A4Q4UJ75 823 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ANKRD20A8PQ5CZ79 823 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ANKRD20A2Q5SQ80 823 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 ANKRD20A1Q5TYW2 823 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 C12orf60Q5U649 245 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
NPC1L1-204ENST00000546276 CFAP36Q96G28 342 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms