RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TJAP1Q5JTD0 557 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 TTC38Q5R3I4 469 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 TPH2Q8IWU9 490 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 CMTR2Q8IYT2 770 aaKnown RBP13.2□□□□□ -0.3
HDAC4-216ENST00000544989 FBXO22Q8NEZ5 403 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 RSPH1Q8WYR4 309 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 DYDC2Q96IM9 177 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 HSD17B14Q9BPX1 270 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 EIF2AK1Q9BQI3 630 aaKnown RBP13.2□□□□□ -0.3
HDAC4-216ENST00000544989 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 RAB34Q9BZG1 259 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 ELAC1Q9H777 363 aaKnown RBP13.2□□□□□ -0.3
HDAC4-216ENST00000544989 CERS4Q9HA82 394 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 RGS18Q9NS28 235 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 ANKEF1Q9NU02 776 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-216ENST00000544989 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 PCDHB7Q9Y5E2 793 aa13.2□□□□□ -0.3
HDAC4-216ENST00000544989 H3BQV1 296 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 DGKIO75912 1065 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 SLITRK3O94933 977 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 PLA2G5P39877 138 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-216ENST00000544989 PCBP1Q15365 356 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■■■ 29.1
HDAC4-216ENST00000544989 HAUS3Q68CZ6 603 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 FAM228AQ86W67 206 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 TMEM40Q8WWA1 233 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
HDAC4-216ENST00000544989 LINC01599Q8WXQ3 324 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 CLP1Q92989 425 aaKnown RBP13.19□□□□□ -0.3
HDAC4-216ENST00000544989 ZNF689Q96CS4 500 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-216ENST00000544989 ADAM2Q99965 735 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 C11orf84Q9BUA3 381 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-216ENST00000544989 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 DHX33Q9H6R0 707 aaKnown RBP13.19□□□□□ -0.3
HDAC4-216ENST00000544989 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 RC3H2Q9HBD1 1191 aaKnown RBP13.19□□□□□ -0.3
HDAC4-216ENST00000544989 TUFT1Q9NNX1 390 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 CHST12Q9NRB3 414 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 MTCH2Q9Y6C9 303 aa13.19□□□□□ -0.3
HDAC4-216ENST00000544989 C5orf67F2Z3F1 127 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 DGAT1O75907 488 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 ARHGEF15O94989 841 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 SKIP12755 728 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 GJB2P29033 226 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 CYP4A11Q02928 519 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 GRB10Q13322 594 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 CTTNQ14247 550 aaKnown RBP13.18□□□□□ -0.3
HDAC4-216ENST00000544989 MXD4Q14582 209 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-216ENST00000544989 ZNF174Q15697 407 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 EPC2Q52LR7 807 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 NAALADL2Q58DX5 795 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 XKR9Q5GH70 373 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 RTN4RL1Q86UN2 441 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-216ENST00000544989 RHPN2Q8IUC4 686 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 TMEM192Q8IY95 271 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 PPP1R16BQ96T49 567 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 POLR3CQ9BUI4 534 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-216ENST00000544989 TMEM161AQ9NX61 479 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
HDAC4-216ENST00000544989 CARNS1A5YM72 827 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 TMEM150BA6NC51 233 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 EPOPA6NHQ4 379 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 C9IYK1 514 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 H3BNC9 293 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 PDCP20941 246 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-216ENST00000544989 BMPR1AP36894 532 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC4-216ENST00000544989 NPEPPSP55786 919 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 FAM189BP81408 668 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 PDIA5Q14554 519 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 DSC3Q14574 896 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 EMC2Q15006 297 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 AAK1Q2M2I8 961 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 MCTP1Q6DN14 999 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 SRGAP1Q7Z6B7 1085 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
HDAC4-216ENST00000544989 NACC1Q96RE7 527 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 MTRQ99707 1265 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 C17orf80Q9BSJ5 609 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 TMEM60Q9H2L4 133 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 ATP6V0A4Q9HBG4 840 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 AAASQ9NRG9 546 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 WRAP73Q9P2S5 460 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-216ENST00000544989 DAXXQ9UER7 740 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-216ENST00000544989 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-216ENST00000544989 LOXHD1Q8IVV2 1947 aa13.17□□□□□ -0.3
HDAC4-216ENST00000544989 POTEMA6NI47 508 aa13.16□□□□□ -0.3
HDAC4-216ENST00000544989 WNT7AO00755 349 aa13.16□□□□□ -0.3
HDAC4-216ENST00000544989 LPXNO60711 386 aa13.16□□□□□ -0.3
HDAC4-216ENST00000544989 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms