RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 ALCAMQ13740 583 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 EMC2Q15006 297 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 CCL14Q16627 93 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 NFIL3Q16649 462 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 DUSP28Q4G0W2 176 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 HAUS6Q7Z4H7 955 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 SPIRE2Q8WWL2 714 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
TNC-213ENST00000544972 GLG1Q92896 1179 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 NOC4LQ9BVI4 516 aaKnown RBP12.51□□□□□ -0.41
TNC-213ENST00000544972 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
TNC-213ENST00000544972 ZSWIM8A7E2V4 1837 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 ITIH6Q6UXX5 1313 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 CETN3O15182 167 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 CLIC2O15247 247 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 NR3C1P04150 777 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 MARK3P27448 753 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 DNM2P50570 870 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
TNC-213ENST00000544972 CCZ1BP86790 482 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 CCZ1P86791 482 aaPredicted RBP12.5□□□□□ -0.41
TNC-213ENST00000544972 GOLGA8FQ08AF8 430 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 GOLGA8DPQ0D2H9 430 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 NOGQ13253 232 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 PLCB4Q15147 1175 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 MAN2A1Q16706 1144 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 PRAMEF19Q5SWL8 479 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 IQSEC1Q6DN90 963 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 TMEM161BQ8NDZ6 487 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 ATP8B4Q8TF62 1192 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 FAM167AQ96KS9 214 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 GBP3Q9H0R5 595 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 SMARCAD1Q9H4L7 1026 aa12.5□□□□□ -0.41
TNC-213ENST00000544972 ZHX1Q9UKY1 873 aaPredicted RBP12.5□□□□□ -0.41
TNC-213ENST00000544972 A0A1W2PQC6 194 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 TNPO2O14787 897 aaKnown RBP12.49□□□□□ -0.41
TNC-213ENST00000544972 AKAP3O75969 853 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 GNA14O95837 355 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 ALDH1A1P00352 501 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 CYP2B6P20813 491 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 ARL2P36404 184 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 SLC26A2P50443 739 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 DMP1Q13316 513 aaPredicted RBP12.49□□□□□ -0.41
TNC-213ENST00000544972 IRF5Q13568 498 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 DEFB115Q30KQ5 88 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 VWA3BQ502W6 1294 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 TRIM59Q8IWR1 403 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 TC2NQ8N9U0 490 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 SLC17A8Q8NDX2 589 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 AFG1LQ8WV93 481 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 CAPNS2Q96L46 248 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
TNC-213ENST00000544972 NDST4Q9H3R1 872 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 RRAGDQ9NQL2 400 aaPredicted RBP12.49□□□□□ -0.41
TNC-213ENST00000544972 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 DMAC2Q9NW81 257 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 ADGRA3Q8IWK6 1321 aa12.49□□□□□ -0.41
TNC-213ENST00000544972 CCDC169A6NNP5 214 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 MAFO75444 373 aaPredicted RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 GYPCP04921 128 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 LGALS2P05162 132 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 SFPQP23246 707 aaKnown RBP eCLIP12.48□□□□□ -0.41
TNC-213ENST00000544972 RFC5P40937 340 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 RGS2P41220 211 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 CASP4P49662 377 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 RBL2Q08999 1139 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 OLFML2BQ68BL8 750 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 SLC7A3Q8WY07 619 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 TMEM143Q96AN5 459 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 ACCSQ96QU6 501 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 APBA2Q99767 749 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 ARHGAP39Q9C0H5 1083 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 RNPEPQ9H4A4 650 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 TMEM206Q9H813 350 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 KMT5AQ9NQR1 393 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 IGKV6-21A0A0C4DH24 114 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 TISP43B9A030 160 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 RNF225M0QZC1 329 aaPredicted RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 PES1O00541 588 aaKnown RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 TPM2P07951 284 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 HOXD8P13378 290 aaPredicted RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 GLRA2P23416 452 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 MSNP26038 577 aaKnown RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 CYP2C19P33261 490 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 SMTNP53814 917 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 ADKP55263 362 aaKnown RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 LACTBP83111 547 aaPredicted RBP12.48□□□□□ -0.41
TNC-213ENST00000544972 TBC1D8BQ0IIM8 1120 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 HS2ST1Q7LGA3 356 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 FRMD5Q7Z6J6 570 aa12.48□□□□□ -0.41
TNC-213ENST00000544972 ZNF784Q8NCA9 323 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms