RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ANKFY1Q9P2R3 1169 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PAPPAQ13219 1627 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 LAMA4Q16363 1823 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 MIF4GDA9UHW6 222 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 UCHL3P15374 230 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 RPA1P27694 616 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 NMT1P30419 496 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 PBX1P40424 430 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PEX3P56589 373 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PPP2R5AQ15172 486 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 STYK1Q6J9G0 422 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 SYT2Q8N9I0 419 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 GBP5Q96PP8 586 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 SLITRK6Q9H5Y7 841 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 RBM12Q9NTZ6 932 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 SERPINA10Q9UK55 444 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PLAGL2Q9UPG8 496 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 WNT7AO00755 349 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 THAP12O43422 761 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 MED24O75448 989 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PLTPP55058 493 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 GPC5P78333 572 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 SLMAPQ14BN4 828 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 ZKSCAN8Q15776 578 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 SGO2Q562F6 1265 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 GKAP1Q5VSY0 366 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 FYB2Q5VWT5 728 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 CENPPQ6IPU0 288 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 CCDC13Q8IYE1 715 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 C4orf32Q8N8J7 132 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 CEP120Q8N960 986 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 MGARPQ8TDB4 240 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 POLD4Q9HCU8 107 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 RGL1Q9NZL6 768 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 MYH7P12883 1935 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 LRRC10BA6NIK2 292 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 TNNC2P02585 160 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 ASNSP08243 561 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PRLRP16471 622 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 EIF2AK2P19525 551 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 LIG3P49916 1009 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 EVX2Q03828 476 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 KLHDC7AQ5VTJ3 777 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PNMA8AQ86V59 439 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 TMEM139Q8IV31 216 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 ZBTB8OSQ8IWT0 167 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 XXYLT1Q8NBI6 393 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 RFFLQ8WZ73 363 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 TBC1D31Q96DN5 1066 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 TSNARE1Q96NA8 513 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 MTMR9Q96QG7 549 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 STK33Q9BYT3 514 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 HSD3B7Q9H2F3 369 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 RAVER2Q9HCJ3 691 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 NRBP2Q9NSY0 501 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 ZNF446Q9NWS9 450 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PRR12Q9ULL5 1215 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 IPO5O00410 1097 aaKnown RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 KLRC4O43908 158 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 CYP11B2P19099 503 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 SFNP31947 248 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 MEA1Q16626 185 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 TTLL6Q8N841 843 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 MORC4Q8TE76 937 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 CDHR1Q96JP9 859 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 PPP1R12CQ9BZL4 782 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 HOMER3Q9NSC5 361 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 SMARCAL1Q9NZC9 954 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ANKRD36CQ5JPF3 1778 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 GAKO14976 1311 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ESYT3A0FGR9 886 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 LRRIQ4A6NIV6 560 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 MSH4O15457 936 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 KRT19P08727 400 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 SHMT1P34896 483 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 FMO5P49326 533 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 LRIG3Q6UXM1 1119 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 SEPT14Q6ZU15 432 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ATP6V1G3Q96LB4 118 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ZDHHC15Q96MV8 337 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 AGPAT1Q99943 283 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 TIPINQ9BVW5 301 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 VPS37BQ9H9H4 285 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ATP6V0A4Q9HBG4 840 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 BAIAP2L1Q9UHR4 511 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 RAB21Q9UL25 225 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 NOVA2Q9UNW9 492 aaKnown RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 CICQ96RK0 1608 aaPredicted RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 KDM4FA0A1W2PPD8 638 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 PODXLO00592 558 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 CASQ2O14958 399 aaPredicted RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 SLC16A4O15374 487 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 SART1O43290 800 aaKnown RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 MAGEA9P43362 315 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 GCLMP48507 274 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 RWDD2BP57060 319 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ARMC9Q7Z3E5 817 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 LDHDQ86WU2 507 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 CCDC89Q8N998 374 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms