RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 APEX2Q9UBZ4 518 aa14.18□□□□□ -0.14
CPSF7-223ENST00000544669 FEZ2Q9UHY8 353 aaPredicted RBP14.18□□□□□ -0.14
CPSF7-223ENST00000544669 A0A087WUV0 522 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-223ENST00000544669 ANKRD62A6NC57 917 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 F8VZ95 297 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 EIF3BP55884 814 aaKnown RBP14.17□□□□□ -0.14
CPSF7-223ENST00000544669 GNGT1P63211 74 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 HLTFQ14527 1009 aaKnown RBP eCLIP14.17□□□□□ -0.14
CPSF7-223ENST00000544669 ENOX2Q16206 610 aaKnown RBP14.17□□□□□ -0.14
CPSF7-223ENST00000544669 ODR4Q5SWX8 454 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 USP37Q86T82 979 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 SYCP3Q8IZU3 236 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 RIN2Q8WYP3 895 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-223ENST00000544669 DYDC2Q96IM9 177 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 ATP6V1G3Q96LB4 118 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 VPS33BQ9H267 617 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 GGA2Q9UJY4 613 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 DBR1Q9UK59 544 aaKnown RBP14.17□□□□□ -0.14
CPSF7-223ENST00000544669 DNAJC12Q9UKB3 198 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 STXBP5LQ9Y2K9 1186 aa14.17□□□□□ -0.14
CPSF7-223ENST00000544669 EML1O00423 815 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 OPLAHO14841 1288 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 RAD51CO43502 376 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 EVI5O60447 810 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 GGPS1O95749 300 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 MYZAPP0CAP1 466 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 HOXA13P31271 388 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-223ENST00000544669 ABCD1P33897 745 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 OGFOD1Q8N543 542 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 RBM46Q8TBY0 533 aaKnown RBP14.16□□□□□ -0.14
CPSF7-223ENST00000544669 BCAS4Q8TDM0 211 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 U2AF1L4Q8WU68 220 aaKnown RBP14.16□□□□□ -0.14
CPSF7-223ENST00000544669 CASKIN2Q8WXE0 1202 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 FAM81BQ96LP2 452 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 PACSIN1Q9BY11 444 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 FAM129AQ9BZQ8 928 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 TDRD3Q9H7E2 651 aaKnown RBP14.16□□□□□ -0.14
CPSF7-223ENST00000544669 VCPKMTQ9H867 229 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 AGPAT3Q9NRZ7 376 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 GINM1Q9NU53 330 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.16□□□□□ -0.14
CPSF7-223ENST00000544669 RGL1Q9NZL6 768 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 KIF13BQ9NQT8 1826 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 ARFGEF1Q9Y6D6 1849 aa14.16□□□□□ -0.14
CPSF7-223ENST00000544669 FAM187AA6NFU0 413 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 BHMG1C9JSJ3 638 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 DDX3XO00571 662 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■■□ 20.9
CPSF7-223ENST00000544669 CLIC2O15247 247 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 SART1O43290 800 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 EXOC3O60645 756 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 P4HBP07237 508 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 CACNB3P54284 484 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 MYL7Q01449 175 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 BFSP1Q12934 665 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 CTTNQ14247 550 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 KIF22Q14807 665 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 DRAP1Q14919 205 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 NT5DC3Q86UY8 548 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 KLHL7Q8IXQ5 586 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 METTL13Q8N6R0 699 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 TSEN2Q8NCE0 465 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 SEC14L1Q92503 715 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 ACCSQ96QU6 501 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 P2RX7Q99572 595 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 ST6GALNAC4Q9H4F1 302 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 PARP2Q9UGN5 583 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 KCNG1Q9UIX4 513 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 RASAL2Q9UJF2 1139 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 EXOC7Q9UPT5 735 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 USP20Q9Y2K6 914 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 NOC2LQ9Y3T9 749 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 ANKRD31Q8N7Z5 1873 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 RSPH10B2B2RC85 870 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 LYPLA2O95372 231 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 RSPH10BP0C881 870 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 CASP4P49662 377 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 GALCP54803 685 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 DRG2P55039 364 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 ENPEPQ07075 957 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 DHX34Q14147 1143 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 ARMC9Q7Z3E5 817 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 UBL4BQ8N7F7 174 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 HVCN1Q96D96 273 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 MXRA8Q9BRK3 442 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 INTS2Q9H0H0 1204 aaKnown RBP14.15□□□□□ -0.14
CPSF7-223ENST00000544669 TBC1D22BQ9NU19 505 aa14.15□□□□□ -0.14
CPSF7-223ENST00000544669 IPO5O00410 1097 aaKnown RBP14.14□□□□□ -0.15
CPSF7-223ENST00000544669 NR1D1P20393 614 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 AGBL2Q5U5Z8 902 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 B3GNT9Q6UX72 402 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 PIGOQ8TEQ8 1089 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 WDR18Q9BV38 432 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 STRA6Q9BX79 667 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 EHD2Q9NZN4 543 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 TCEAL9Q9UHQ7 104 aa14.14□□□□□ -0.15
CPSF7-223ENST00000544669 FDX1P10109 184 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 NMT1P30419 496 aaKnown RBP14.13□□□□□ -0.15
CPSF7-223ENST00000544669 MCCD1P59942 119 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-223ENST00000544669 GHRHRQ02643 423 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 249.2 ms