RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 NUP188Q5SRE5 1749 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 GFPT2O94808 682 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 PHKA1P46020 1223 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 YARSP54577 528 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 MARSP56192 900 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 ENOX2Q16206 610 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 NT5DC3Q86UY8 548 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 EXOC3L1Q86VI1 746 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 LCORLQ8N3X6 602 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 PTPRN2Q92932 1015 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 ARHGEF2Q92974 986 aaKnown RBP11.16□□□□□ -0.62
TCF4-209ENST00000544241 TRIM51Q9BSJ1 452 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 MTFR1LQ9H019 292 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 PHF24Q9UPV7 400 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 USP20Q9Y2K6 914 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 STXBP5LQ9Y2K9 1186 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 GMEB1Q9Y692 573 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 USH1CQ9Y6N9 552 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 FLT1P17948 1338 aa11.16□□□□□ -0.62
TCF4-209ENST00000544241 RIPK2O43353 540 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PRKAB2O43741 272 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 SLC5A1P13866 664 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 NT5C2P49902 561 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 POLGP54098 1239 aaPredicted RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 DBN1Q16643 649 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 RNF220Q5VTB9 566 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 BICDL1Q6ZP65 573 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 LONP2Q86WA8 852 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 JAMLQ86YT9 394 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 SMC1BQ8NDV3 1235 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 FAM13CQ8NE31 585 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 FBXO25Q8TCJ0 367 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 CTNNBL1Q8WYA6 563 aaPredicted RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 CDK5RAP3Q96JB5 506 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 ZNF333Q96JL9 665 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PLEKHG4BQ96PX9 1271 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PITPNM3Q9BZ71 974 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 RAB34Q9BZG1 259 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PIDD1Q9HB75 910 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 TRAF5O00463 557 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 TRAFD1O14545 582 aaPredicted RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 CETN3O15182 167 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 ECE2O60344 883 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PYGBP11216 843 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 KCNA3P22001 575 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PRKCIP41743 596 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 IL9RQ01113 521 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PTK2Q05397 1052 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 SOGA3Q5TF21 947 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 RASIP1Q5U651 963 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 BARGINQ6ZT62 677 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 MROH5Q6ZUA9 1318 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 RPTORQ8N122 1335 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 VGLL2Q8N8G2 317 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 EPS8L3Q8TE67 593 aaKnown RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 NR1H4Q96RI1 486 aaPredicted RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 TUBB6Q9BUF5 446 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 PCMTD2Q9NV79 361 aa11.15□□□□□ -0.62
TCF4-209ENST00000544241 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 THRAP3Q9Y2W1 955 aaKnown RBP11.15□□□□□ -0.62
TCF4-209ENST00000544241 MYH1P12882 1939 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 SYNGAP1Q96PV0 1343 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 EIF4E1BA6NMX2 242 aaKnown RBP11.14□□□□□ -0.63
TCF4-209ENST00000544241 KIAA0391O15091 583 aaKnown RBP11.14□□□□□ -0.63
TCF4-209ENST00000544241 ZSCAN9O15535 394 aaPredicted RBP11.14□□□□□ -0.63
TCF4-209ENST00000544241 GGPS1O95749 300 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 MARK3P27448 753 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 GSTT1P30711 240 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 TUBP50607 506 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 RCN2Q14257 317 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 GPIHBP1Q8IV16 184 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 MGARPQ8TDB4 240 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 NDNQ99608 321 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 CENPKQ9BS16 269 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
TCF4-209ENST00000544241 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 KCNK9Q9NPC2 374 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 ATP8A2Q9NTI2 1148 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 IL1RAPL1Q9NZN1 696 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 CIDEBQ9UHD4 219 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 COMMD3-BMI1R4GMX3 469 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 NKRFO15226 690 aaKnown RBP eCLIP11.14□□□□□ -0.63
TCF4-209ENST00000544241 DESP17661 470 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 SLCO1A2P46721 670 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 CACNA2D1P54289 1103 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 MTA1Q13330 715 aa11.14□□□□□ -0.63
TCF4-209ENST00000544241 PRPF4BQ13523 1007 aaKnown RBP11.14□□□□□ -0.63
TCF4-209ENST00000544241 MAP7Q14244 749 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms