RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NLRP4Q96MN2 994 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 GBP4Q96PP9 640 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 OSMRQ99650 979 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 CELF4Q9BZC1 486 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 GCOM2Q9BZD3 368 aaPredicted RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 UBE2OQ9C0C9 1292 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 LRRC27Q9C0I9 530 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 POLR3FQ9H1D9 316 aaPredicted RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 DHX33Q9H6R0 707 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 PCDH10Q9P2E7 1040 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 STK17AQ9UEE5 414 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 LTBP2Q14767 1821 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 SCN5AQ14524 2016 aa7□□□□□ -1.29
LTBR-212ENST00000543542 A0A087WZ62 844 aa7□□□□□ -1.29
LTBR-212ENST00000543542 LRRIQ4A6NIV6 560 aa7□□□□□ -1.29
LTBR-212ENST00000543542 CCDC169A6NNP5 214 aa7□□□□□ -1.29
LTBR-212ENST00000543542 ZBBXA8MT70 800 aa7□□□□□ -1.29
LTBR-212ENST00000543542 ASAP2O43150 1006 aa7□□□□□ -1.29
LTBR-212ENST00000543542 HIP1RO75146 1068 aa7□□□□□ -1.29
LTBR-212ENST00000543542 TBCAO75347 108 aaKnown RBP7□□□□□ -1.29
LTBR-212ENST00000543542 RPS6KA5O75582 802 aa7□□□□□ -1.29
LTBR-212ENST00000543542 FAM13AO94988 1023 aa7□□□□□ -1.29
LTBR-212ENST00000543542 FGBP02675 491 aa7□□□□□ -1.29
LTBR-212ENST00000543542 ACRP10323 421 aa7□□□□□ -1.29
LTBR-212ENST00000543542 GHRP10912 638 aa7□□□□□ -1.29
LTBR-212ENST00000543542 CSF2RAP15509 400 aa7□□□□□ -1.29
LTBR-212ENST00000543542 PFKFB1P16118 471 aa7□□□□□ -1.29
LTBR-212ENST00000543542 LIG1P18858 919 aa7□□□□□ -1.29
LTBR-212ENST00000543542 CYP11B2P19099 503 aa7□□□□□ -1.29
LTBR-212ENST00000543542 IBSPP21815 317 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 CMA1P23946 247 aa7□□□□□ -1.29
LTBR-212ENST00000543542 ITGB8P26012 769 aa7□□□□□ -1.29
LTBR-212ENST00000543542 MAGEA10P43363 369 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 SYKP43405 635 aa7□□□□□ -1.29
LTBR-212ENST00000543542 PHKA2P46019 1235 aa7□□□□□ -1.29
LTBR-212ENST00000543542 CRYBB1P53674 252 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 AMPD3Q01432 767 aa7□□□□□ -1.29
LTBR-212ENST00000543542 CACNB1Q02641 598 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 LAMTOR4Q0VGL1 99 aa7□□□□□ -1.29
LTBR-212ENST00000543542 NFX1Q12986 1120 aaKnown RBP7□□□□□ -1.29
LTBR-212ENST00000543542 PAK2Q13177 524 aa7□□□□□ -1.29
LTBR-212ENST00000543542 DRP2Q13474 957 aa7□□□□□ -1.29
LTBR-212ENST00000543542 MXD4Q14582 209 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 PPP2R5AQ15172 486 aa7□□□□□ -1.29
LTBR-212ENST00000543542 TRIM71Q2Q1W2 868 aaKnown RBP7□□□□□ -1.29
LTBR-212ENST00000543542 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 RESP18Q5W5W9 173 aa7□□□□□ -1.29
LTBR-212ENST00000543542 RINT1Q6NUQ1 792 aa7□□□□□ -1.29
LTBR-212ENST00000543542 DYMQ7RTS9 669 aa7□□□□□ -1.29
LTBR-212ENST00000543542 KSR1Q8IVT5 923 aa7□□□□□ -1.29
LTBR-212ENST00000543542 ZBTB8OSQ8IWT0 167 aa7□□□□□ -1.29
LTBR-212ENST00000543542 ZNF710Q8N1W2 664 aa7□□□□□ -1.29
LTBR-212ENST00000543542 SYT2Q8N9I0 419 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 RNF149Q8NC42 400 aa7□□□□□ -1.29
LTBR-212ENST00000543542 DEPTORQ8TB45 409 aa7□□□□□ -1.29
LTBR-212ENST00000543542 PRPF31Q8WWY3 499 aaKnown RBP7□□□□□ -1.29
LTBR-212ENST00000543542 SEPT8Q92599 483 aa7□□□□□ -1.29
LTBR-212ENST00000543542 STAMQ92783 540 aa7□□□□□ -1.29
LTBR-212ENST00000543542 KIFAP3Q92845 792 aa7□□□□□ -1.29
LTBR-212ENST00000543542 CCDC34Q96HJ3 373 aa7□□□□□ -1.29
LTBR-212ENST00000543542 DRC1Q96MC2 740 aa7□□□□□ -1.29
LTBR-212ENST00000543542 CTAGE1Q96RT6 745 aa7□□□□□ -1.29
LTBR-212ENST00000543542 FDXACB1Q9BRP7 624 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 TIPINQ9BVW5 301 aa7□□□□□ -1.29
LTBR-212ENST00000543542 INO80BQ9C086 356 aaPredicted RBP7□□□□□ -1.29
LTBR-212ENST00000543542 WNT8AQ9H1J5 351 aa7□□□□□ -1.29
LTBR-212ENST00000543542 MTIF3Q9H2K0 278 aaKnown RBP7□□□□□ -1.29
LTBR-212ENST00000543542 CUEDC2Q9H467 287 aa7□□□□□ -1.29
LTBR-212ENST00000543542 POLD4Q9HCU8 107 aa7□□□□□ -1.29
LTBR-212ENST00000543542 IL23AQ9NPF7 189 aa7□□□□□ -1.29
LTBR-212ENST00000543542 GPRC5CQ9NQ84 441 aa7□□□□□ -1.29
LTBR-212ENST00000543542 KCNH3Q9ULD8 1083 aa7□□□□□ -1.29
LTBR-212ENST00000543542 MYH11P35749 1972 aa7□□□□□ -1.29
LTBR-212ENST00000543542 A0A087X0B3 334 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 IGKV6-21A0A0C4DH24 114 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 NPHP3-ACAD11A0A0J9YXS1 232 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 A0A1W2PQ27 194 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 A0A1W2PQ64 194 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 A0A1W2PQD8 194 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 SFI1A8K8P3 1242 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 INO80B-WBP1J3KQ70 363 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 GPR182O15218 404 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 PRPF40AO75400 957 aaKnown RBP6.99□□□□□ -1.29
LTBR-212ENST00000543542 ERLIN2O94905 339 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 CHRNA1P02708 482 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 PFKMP08237 780 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 IDEP14735 1019 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 AFMP43652 599 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 KCNJ6P48051 423 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 GPC3P51654 580 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 SLC12A3P55017 1021 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 RBL2Q08999 1139 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 NCBP1Q09161 790 aaKnown RBP6.99□□□□□ -1.29
LTBR-212ENST00000543542 MGAT3Q09327 533 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 DMP1Q13316 513 aaPredicted RBP6.99□□□□□ -1.29
LTBR-212ENST00000543542 IKBKEQ14164 716 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 FAM26DQ5JW98 314 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 FBXO47Q5MNV8 452 aa6.99□□□□□ -1.29
LTBR-212ENST00000543542 CNKSR3Q6P9H4 555 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms