RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 AGAP11Q8TF27 550 aa25.67■■□□□ 1.7
SHD-201ENST00000543264 RFFLQ8WZ73 363 aa25.67■■□□□ 1.7
SHD-201ENST00000543264 NAP1L3Q99457 506 aaPredicted RBP25.67■■□□□ 1.7
SHD-201ENST00000543264 TMOD4Q9NZQ9 345 aa25.67■■□□□ 1.7
SHD-201ENST00000543264 DBR1Q9UK59 544 aaKnown RBP25.67■■□□□ 1.7
SHD-201ENST00000543264 PCDHB13Q9Y5F0 798 aa25.67■■□□□ 1.7
SHD-201ENST00000543264 MAST2Q6P0Q8 1798 aa25.67■■□□□ 1.7
SHD-201ENST00000543264 FAM187AA6NFU0 413 aa25.67■■□□□ 1.7
SHD-201ENST00000543264 CTNNBL1Q8WYA6 563 aaPredicted RBP25.67■■□□□ 1.7
SHD-201ENST00000543264 MEIS1O00470 390 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 CALUO43852 315 aaPredicted RBP25.66■■□□□ 1.7
SHD-201ENST00000543264 AGTP01019 485 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 LDHCP07864 332 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 SLC8A3P57103 927 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 PPATQ06203 517 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 PPP2R5EQ16537 467 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 TBC1D9BQ66K14 1250 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 C18orf8Q96DM3 657 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 NSRP1Q9H0G5 558 aaKnown RBP25.66■■□□□ 1.7
SHD-201ENST00000543264 CARD9Q9H257 536 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 C15orf41Q9Y2V0 281 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 ABCA3Q99758 1704 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 AFF2P51816 1311 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 RPTORQ8N122 1335 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 PPP1R11O60927 126 aaPredicted RBP25.66■■□□□ 1.7
SHD-201ENST00000543264 FGFR4P22455 802 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 PSMC6P62333 389 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 CLEC10AQ8IUN9 316 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 SLC30A5Q8TAD4 765 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 SLC35C1Q96A29 364 aa25.66■■□□□ 1.7
SHD-201ENST00000543264 DIS3Q9Y2L1 958 aaKnown RBP25.66■■□□□ 1.7
SHD-201ENST00000543264 RFC4P35249 363 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 ADCY2Q08462 1091 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 MAPK7Q13164 816 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 PABPC4Q13310 644 aaKnown RBP eCLIP25.65■■□□□ 1.7
SHD-201ENST00000543264 GIT2Q14161 759 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 SLC10A5Q5PT55 438 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 COL23A1Q86Y22 540 aaPredicted RBP25.65■■□□□ 1.7
SHD-201ENST00000543264 ARHGEF26Q96DR7 871 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 JMJD4Q9H9V9 463 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 SEPT11Q9NVA2 429 aaKnown RBP25.65■■□□□ 1.7
SHD-201ENST00000543264 ANKIB1Q9P2G1 1089 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 RASAL2Q9UJF2 1139 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 NR3C1P04150 777 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 NQO1P15559 274 aaKnown RBP25.65■■□□□ 1.7
SHD-201ENST00000543264 DHX34Q14147 1143 aaKnown RBP25.65■■□□□ 1.7
SHD-201ENST00000543264 ADGRF4Q8IZF3 695 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 ALG3Q92685 438 aa25.65■■□□□ 1.7
SHD-201ENST00000543264 RTFDC1Q9BY42 306 aaPredicted RBP25.65■■□□□ 1.7
SHD-201ENST00000543264 PNMA6FA0A0J9YX94 578 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 CLK2P49760 499 aaKnown RBP25.64■■□□□ 1.7
SHD-201ENST00000543264 ZNF268Q14587 947 aaPredicted RBP25.64■■□□□ 1.7
SHD-201ENST00000543264 LRRC14Q15048 493 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 MAB21L3Q8N8X9 362 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 MGARPQ8TDB4 240 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 ECT2Q9H8V3 914 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 GRHL1Q9NZI5 618 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 PITPNM2Q9BZ72 1349 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 NAV1Q8NEY1 1877 aa25.64■■□□□ 1.7
SHD-201ENST00000543264 PDXKO00764 312 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 SNX3O60493 162 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 TMEM253P0C7T8 217 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 RPL21P46778 160 aaKnown RBP25.64■■□□□ 1.69
SHD-201ENST00000543264 ASPRV1Q53RT3 343 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 DYDC1Q8WWB3 177 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 REEP2Q9BRK0 252 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 BCAS3Q9H6U6 928 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 RTCBQ9Y3I0 505 aaKnown RBP25.64■■□□□ 1.69
SHD-201ENST00000543264 ATP8B3O60423 1300 aa25.64■■□□□ 1.69
SHD-201ENST00000543264 RARAP10276 462 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 LMNB1P20700 586 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 NCALDP61601 193 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 CNGA2Q16280 664 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 TTBK2Q6IQ55 1244 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 CCHCR1Q8TD31 782 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 PRCCQ92733 491 aaPredicted RBP25.63■■□□□ 1.69
SHD-201ENST00000543264 GPR101Q96P66 508 aaPredicted RBP25.63■■□□□ 1.69
SHD-201ENST00000543264 CCDC134Q9H6E4 229 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 PSTPIP2Q9H939 334 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 METTL14Q9HCE5 456 aaKnown RBP25.63■■□□□ 1.69
SHD-201ENST00000543264 RASGRF2O14827 1237 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 SOX5P35711 763 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 SLC16A2P36021 539 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 ALDH5A1P51649 535 aaPredicted RBP25.63■■□□□ 1.69
SHD-201ENST00000543264 OLIG1Q8TAK6 271 aa25.63■■□□□ 1.69
SHD-201ENST00000543264 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
SHD-201ENST00000543264 NCANO14594 1321 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 PDE6CP51160 858 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 DRG2P55039 364 aaKnown RBP25.62■■□□□ 1.69
SHD-201ENST00000543264 KCNA1Q09470 495 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 L3MBTL3Q96JM7 780 aaPredicted RBP25.62■■□□□ 1.69
SHD-201ENST00000543264 THAP2Q9H0W7 228 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 KCNMB3Q9NPA1 279 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L15C9J2P7 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L13C9JLJ4 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L11C9JVI0 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L18D6R9N7 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L22D6RA61 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L17D6RBQ6 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L19D6RCP7 530 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms