RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TEX2Q8IWB9 1127 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ZFPM1Q8IX07 1006 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM133AQ8N9E0 248 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 USP38Q8NB14 1042 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 GMCL1P1Q8NEA9 526 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 OLIG1Q8TAK6 271 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ERMNQ8TAM6 284 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ACTRT1Q8TDG2 376 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 WHAMMQ8TF30 809 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 SCFD2Q8WU76 684 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 CASKIN2Q8WXE0 1202 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 TEKT1Q969V4 418 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ARL8AQ96BM9 186 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 BORCS6Q96GS4 357 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 GMCL1Q96IK5 515 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 PBKQ96KB5 322 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ZDHHC15Q96MV8 337 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ZIM3Q96PE6 472 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 HINFPQ9BQA5 517 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 REEP2Q9BRK0 252 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 POLR3CQ9BUI4 534 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 IDI2Q9BXS1 227 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 KANSL2Q9H9L4 492 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 SIX2Q9NPC8 291 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ARMCX3Q9UH62 379 aaPredicted RBP5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ADAMTS1Q9UHI8 967 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 VAV3Q9UKW4 847 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 INTUQ9ULD6 942 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 DNM3Q9UQ16 869 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 STXBP5LQ9Y2K9 1186 aa5.68□□□□□ -1.5
ATPAF1-212ENST00000542495 ASTN1O14525 1302 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ZNF233A6NK53 670 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM86B1E9PN63 330 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 F8W031 263 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 MPHOSPH10O00566 681 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 OPLAHO14841 1288 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 CALUO43852 315 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ATP9BO43861 1147 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ZEB2O60315 1214 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 AKAP3O75969 853 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 GFPT2O94808 682 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 HEXIM1O94992 359 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 KIF4AO95239 1232 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 CPP00450 1065 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM86B2P0C5J1 330 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM153BP0C7A2 387 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ACTN1P12814 892 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC9A1P19634 815 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ECHS1P30084 290 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 CRKP46108 304 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 NPEPPSP55786 919 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 FKBP1AP62942 108 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 HDLBPQ00341 1268 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 IFI16Q16666 785 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM153CQ494X1 144 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 DNAJC21Q5F1R6 531 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 BTNL9Q6UXG8 535 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SH3BP5LQ7L8J4 393 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SFR1Q86XK3 245 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 C10orf67Q8IYJ2 551 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 RASGEF1CQ8N431 466 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SLC35C1Q96A29 364 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 AMNQ9BXJ7 453 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 CAPS2Q9BXY5 557 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ZC3H12CQ9C0D7 883 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ISCUQ9H1K1 167 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 METTL14Q9HCE5 456 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 EPB41L5Q9HCM4 733 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 OLFML3Q9NRN5 406 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 TYW1Q9NV66 732 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 FAM153AQ9UHL3 310 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 RSPH14Q9UHP6 348 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 NAGPAQ9UK23 515 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 NFU1Q9UMS0 254 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 UTRNP46939 3433 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ZMYM2Q9UBW7 1377 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 IGLV3-22A0A075B6J6 115 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 ZSCAN5CA6NGD5 496 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 DDTLA6NHG4 134 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SRRM3A6NNA2 597 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 PIK3CDO00329 1044 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 EIF3DO15371 548 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 MSH4O15457 936 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 TGFB1I1O43294 461 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 RAD51CO43502 376 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 EYA4O95677 639 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 NR3C1P04150 777 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SLURP2P0DP57 97 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 XRCC5P13010 732 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 NPR1P16066 1061 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 GAP43P17677 238 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 RPL13P26373 211 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 EPS15P42566 896 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 SCNN1DP51172 638 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 NAP1L1P55209 391 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 TNNC1P63316 161 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 GUCY2DQ02846 1103 aa5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 PABPC4Q13310 644 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATPAF1-212ENST00000542495 RPS6KA1Q15418 735 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms