RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 GUCY1A3Q02108 690 aa7.37□□□□□ -1.23
NKRF-204ENST00000542113 APOBEC3HQ6NTF7 200 aaKnown RBP7.37□□□□□ -1.23
NKRF-204ENST00000542113 CCDC121Q6ZUS5 278 aa7.37□□□□□ -1.23
NKRF-204ENST00000542113 RBM46Q8TBY0 533 aaKnown RBP7.37□□□□□ -1.23
NKRF-204ENST00000542113 NACC1Q96RE7 527 aa7.37□□□□□ -1.23
NKRF-204ENST00000542113 FMO2Q99518 471 aa7.37□□□□□ -1.23
NKRF-204ENST00000542113 DDX47Q9H0S4 455 aaKnown RBP7.37□□□□□ -1.23
NKRF-204ENST00000542113 APEX2Q9UBZ4 518 aa7.37□□□□□ -1.23
NKRF-204ENST00000542113 GMNCA6NCL1 334 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 F5H6K3 240 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 MEIS1O00470 390 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 HPDP32754 393 aaPredicted RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 MYL7Q01449 175 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 KLRC3Q07444 240 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 ABCB5Q2M3G0 1257 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 RINT1Q6NUQ1 792 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 TATDN1Q6P1N9 297 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 TMC3Q7Z5M5 1100 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 SLC9A9Q8IVB4 645 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 FAM178BQ8IXR5 827 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 CERS5Q8N5B7 392 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 CABS1Q96KC9 395 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 MTRF1LQ9UGC7 380 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 USP21Q9UK80 565 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 SAMM50Q9Y512 469 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 LTBP4Q8N2S1 1624 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 ECHS1P30084 290 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 HOXD13P35453 343 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 DRG2P55039 364 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 PSMC6P62333 389 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 ZNF844Q08AG5 666 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 PPP2R5CQ13362 524 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 TCEAL1Q15170 157 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 KRT71Q3SY84 523 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 SWT1Q5T5J6 900 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 LRCH2Q5VUJ6 765 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 TTC19Q6DKK2 380 aaPredicted RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 C11orf63Q6NUN7 778 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 PRPF38AQ8NAV1 312 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 SLC30A5Q8TAD4 765 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 RUSC1Q9BVN2 902 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 AP1M1Q9BXS5 423 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 DNAJC12Q9UKB3 198 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 CAPN7Q9Y6W3 813 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 COL2A1P02458 1487 aaPredicted RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 CCDC169A6NNP5 214 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 FAM86B1E9PN63 330 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 H0YGN5 161 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 POLRMTO00411 1230 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 PODXLO00592 558 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 FGGP02679 453 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 FAM86B2P0C5J1 330 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 SCNN1DP51172 638 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 PRELPP51888 382 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 ZNF131P52739 623 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 SNRPFP62306 86 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 DR1Q01658 176 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 CYP4A11Q02928 519 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 DHX9Q08211 1270 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 DRAP1Q14919 205 aaPredicted RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 RBM26Q5T8P6 1007 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 CCDC50Q8IVM0 306 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 CENPTQ96BT3 561 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 BORCS6Q96GS4 357 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 PSMD1Q99460 953 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 PLVAPQ9BX97 442 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 INTS2Q9H0H0 1204 aaKnown RBP7.36□□□□□ -1.23
NKRF-204ENST00000542113 YY1AP1Q9H869 796 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 AMACRQ9UHK6 382 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 NFS1Q9Y697 457 aa7.36□□□□□ -1.23
NKRF-204ENST00000542113 PCNTO95613 3336 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 ANKRD65E5RJM6 399 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 CLIC2O15247 247 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 DAPK3O43293 454 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 TGFB1I1O43294 461 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 GAS7O60861 476 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 PPFIA2O75334 1257 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 ENTPD3O75355 529 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 NDUFB10O96000 172 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 ZBTB48P10074 688 aaPredicted RBP7.35□□□□□ -1.23
NKRF-204ENST00000542113 MAPTP10636 758 aaKnown RBP7.35□□□□□ -1.23
NKRF-204ENST00000542113 GUCY2CP25092 1073 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 CHRNA3P32297 505 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 CASP4P49662 377 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 BYSLQ13895 437 aaKnown RBP7.35□□□□□ -1.23
NKRF-204ENST00000542113 KIF22Q14807 665 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 TNIP1Q15025 636 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 USH1GQ495M9 461 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 RNF187Q5TA31 235 aaPredicted RBP7.35□□□□□ -1.23
NKRF-204ENST00000542113 SEL1L2Q5TEA6 688 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 INTS8Q75QN2 995 aaKnown RBP7.35□□□□□ -1.23
NKRF-204ENST00000542113 CACNA2D3Q8IZS8 1091 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 SLC17A8Q8NDX2 589 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 SLC35G2Q8TBE7 412 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 HSD17B14Q9BPX1 270 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 ERP44Q9BS26 406 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 TACO1Q9BSH4 297 aaKnown RBP7.35□□□□□ -1.23
NKRF-204ENST00000542113 TMEM206Q9H813 350 aa7.35□□□□□ -1.23
NKRF-204ENST00000542113 ARHGEF10LQ9HCE6 1279 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms