RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 NFS1Q9Y697 457 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 BMP3P12645 472 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 CD302Q8IX05 232 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 PRMT6Q96LA8 375 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-208ENST00000542068 MLXIPLQ9NP71 852 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 PCDHA2Q9Y5H9 948 aa16.63■□□□□ 0.25
CNOT9-208ENST00000542068 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 LRRC57Q8N9N7 239 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 CCDC17Q96LX7 622 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 BAIAP2L1Q9UHR4 511 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 NR3C1P04150 777 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 VIMP08670 466 aaKnown RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 NMT1P30419 496 aaKnown RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 PDE6BP35913 854 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 COG2Q14746 738 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 FAM133BQ5BKY9 247 aaKnown RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 TMC3Q7Z5M5 1100 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 FMO2Q99518 471 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 TAS2R14Q9NYV8 317 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 CD2APQ9Y5K6 639 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 MYH1P12882 1939 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 IGSF9BQ9UPX0 1349 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 TRAPPC3O43617 180 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 SORBS3O60504 671 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 POLD1P28340 1107 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 GKAP1Q5VSY0 366 aaPredicted RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 SYDE2Q5VT97 1194 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 ZNF746Q6NUN9 644 aaPredicted RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 P2RX7Q99572 595 aaKnown RBP16.62■□□□□ 0.25
CNOT9-208ENST00000542068 ERVK-5Q9HDB9 667 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
CNOT9-208ENST00000542068 EVI5O60447 810 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 SP4Q02446 784 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 PPP1R7Q15435 360 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 OTUD6AQ7L8S5 288 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 DNAJC17Q9NVM6 304 aaKnown RBP16.61■□□□□ 0.25
CNOT9-208ENST00000542068 FAM198AQ9UFP1 575 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 TMEM59LQ9UK28 342 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 hCG_1984214I3L0E3 225 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 GCFC2P16383 781 aaKnown RBP16.61■□□□□ 0.25
CNOT9-208ENST00000542068 ADCY1Q08828 1119 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 GIT2Q14161 759 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 SWT1Q5T5J6 900 aaKnown RBP16.61■□□□□ 0.25
CNOT9-208ENST00000542068 C15orf52Q6ZUT6 534 aaKnown RBP16.61■□□□□ 0.25
CNOT9-208ENST00000542068 SPATS2Q86XZ4 545 aaKnown RBP16.61■□□□□ 0.25
CNOT9-208ENST00000542068 ZNF713Q8N859 430 aaPredicted RBP16.61■□□□□ 0.25
CNOT9-208ENST00000542068 ACTRT1Q8TDG2 376 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 PSMD1Q99460 953 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 RUSC1Q9BVN2 902 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 AZI2Q9H6S1 392 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 FBXO28Q9NVF7 368 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 GEMIN8Q9NWZ8 242 aaKnown RBP16.61■□□□□ 0.25
CNOT9-208ENST00000542068 RABGAP1Q9Y3P9 1069 aa16.61■□□□□ 0.25
CNOT9-208ENST00000542068 AHDC1Q5TGY3 1603 aaPredicted RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 HOXD13P35453 343 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 JAG1P78504 1218 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 IFI35P80217 286 aaPredicted RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 HIBCHQ6NVY1 386 aaPredicted RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 PALB2Q86YC2 1186 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 ARHGEF26Q96DR7 871 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 MASTLQ96GX5 879 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 TNRC6CQ9HCJ0 1690 aaKnown RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 F8VZ95 297 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 MEIS2O14770 477 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 STAT1P42224 750 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 LRRC14Q15048 493 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 CYB5D1Q6P9G0 228 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 SH3BP5LQ7L8J4 393 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 NT5DC3Q86UY8 548 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 LNX1Q8TBB1 728 aaPredicted RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 CTNNBL1Q8WYA6 563 aaPredicted RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 YY1AP1Q9H869 796 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 TCEAL9Q9UHQ7 104 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 FOXO6A8MYZ6 492 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 PPP1R12BO60237 982 aaPredicted RBP16.6■□□□□ 0.25
CNOT9-208ENST00000542068 CLTAP09496 248 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 CHN1P15882 459 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 FGFR4P22455 802 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 DR1Q01658 176 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 PCIF1Q9H4Z3 704 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 SCN7AQ01118 1682 aa16.6■□□□□ 0.25
CNOT9-208ENST00000542068 EML1O00423 815 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 CHUKO15111 745 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 SNHG28P0DPA3 235 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 SMARCA1P28370 1054 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms