RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 GRIN1Q05586 938 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 IKBKEQ14164 716 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 PPP2R5AQ15172 486 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 PLEKHG4Q58EX7 1191 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 RRAGBQ5VZM2 374 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 TDHQ8IZJ6 230 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 ZBTB10Q96DT7 871 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 EPSTI1Q96J88 318 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 SCLT1Q96NL6 688 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 CLIC6Q96NY7 704 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 SH2D3AQ9BRG2 576 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 FTHL17Q9BXU8 183 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 GCOM2Q9BZD3 368 aaPredicted RBP20.85■□□□□ 0.93
VPS33A-205ENST00000541169 LRRC27Q9C0I9 530 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 PRO3102Q9H379 93 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 C17orf75Q9HAS0 396 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 RNF216Q9NWF9 866 aaPredicted RBP20.85■□□□□ 0.93
VPS33A-205ENST00000541169 PCDHA7Q9UN72 937 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 COL4A3BPQ9Y5P4 624 aa20.85■□□□□ 0.93
VPS33A-205ENST00000541169 E9PMD0 336 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
VPS33A-205ENST00000541169 VTNP04004 478 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 PLCG1P19174 1290 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
VPS33A-205ENST00000541169 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 MKRN4PQ13434 485 aaPredicted RBP20.84■□□□□ 0.93
VPS33A-205ENST00000541169 KARSQ15046 597 aaKnown RBP20.84■□□□□ 0.93
VPS33A-205ENST00000541169 AXDND1Q5T1B0 1012 aaPredicted RBP20.84■□□□□ 0.93
VPS33A-205ENST00000541169 CHRDL2Q6WN34 429 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 DEFB128Q7Z7B8 93 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 RHPN2Q8IUC4 686 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 PRPF31Q8WWY3 499 aaKnown RBP20.84■□□□□ 0.93
VPS33A-205ENST00000541169 NLRP7Q8WX94 980 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 HERVK_113Q902F9 699 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 DRC1Q96MC2 740 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 NFKBIZQ9BYH8 718 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 IFIH1Q9BYX4 1025 aaKnown RBP20.84■□□□□ 0.93
VPS33A-205ENST00000541169 ADAMTS10Q9H324 1103 aa20.84■□□□□ 0.93
VPS33A-205ENST00000541169 PLA2G4BP0C869 781 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 SCP2P22307 547 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 ARL2P36404 184 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 TMEM62Q0P6H9 643 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 LAMTOR4Q0VGL1 99 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 MBTPS1Q14703 1052 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 KIZQ2M2Z5 673 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 TMEM240Q5SV17 173 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 ZNF365Q70YC5 407 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 SRGAP1Q7Z6B7 1085 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 IQUBQ8NA54 791 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 LARP4BQ92615 738 aaKnown RBP20.83■□□□□ 0.93
VPS33A-205ENST00000541169 TMEM143Q96AN5 459 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 MAGEF1Q9HAY2 307 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 XPNPEP1Q9NQW7 623 aa20.83■□□□□ 0.93
VPS33A-205ENST00000541169 PHLPP2Q6ZVD8 1323 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 RPS6KA5O75582 802 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 DARSP14868 501 aaKnown RBP20.82■□□□□ 0.92
VPS33A-205ENST00000541169 SFPQP23246 707 aaKnown RBP eCLIP20.82■□□□□ 0.92
VPS33A-205ENST00000541169 CMA1P23946 247 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 STAT6P42226 847 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 PHKA2P46019 1235 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 PAK2Q13177 524 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 LPIN1Q14693 890 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 GPNMBQ14956 572 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 RESP18Q5W5W9 173 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 RINT1Q6NUQ1 792 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 C1orf186Q6ZWK4 172 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 C16orf59Q7L2K0 433 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 RAD54LQ92698 747 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 IFT74Q96LB3 600 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.82■□□□□ 0.92
VPS33A-205ENST00000541169 ODF2LQ9ULJ1 636 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 GINS2Q9Y248 185 aa20.82■□□□□ 0.92
VPS33A-205ENST00000541169 TCHHQ07283 1943 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 A0A1W2PQ27 194 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 A0A1W2PQ64 194 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 A0A1W2PQD8 194 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 GHRP10912 638 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 SLC12A3P55017 1021 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 DRP2Q13474 957 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 SPECC1Q5M775 1068 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 FAM102BQ5T8I3 360 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 KCNK18Q7Z418 384 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 IFNLR1Q8IU57 520 aaPredicted RBP20.81■□□□□ 0.92
VPS33A-205ENST00000541169 PHOSPHO2Q8TCD6 241 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 POLR3FQ9H1D9 316 aaPredicted RBP20.81■□□□□ 0.92
VPS33A-205ENST00000541169 C2orf40Q9H1Z8 148 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 BMP2KQ9NSY1 1161 aaPredicted RBP20.81■□□□□ 0.92
VPS33A-205ENST00000541169 USP25Q9UHP3 1055 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 SCN5AQ14524 2016 aa20.81■□□□□ 0.92
VPS33A-205ENST00000541169 A0A087WWV3 80 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 GOLGA6L4A6NEF3 574 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 SSBP05455 408 aaKnown RBP eCLIP20.8■□□□□ 0.92
VPS33A-205ENST00000541169 ACRP10323 421 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 ABCD1P33897 745 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 NAMPTP43490 491 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 KCNJ6P48051 423 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 EPHB4P54760 987 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 AMPD3Q01432 767 aa20.8■□□□□ 0.92
VPS33A-205ENST00000541169 NCBP1Q09161 790 aaKnown RBP20.8■□□□□ 0.92
VPS33A-205ENST00000541169 RASIP1Q5U651 963 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms