RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 PDZD8Q8NEN9 1154 aa6.35□□□□□ -1.39
PRKDC-209ENST00000540819 HDAC2Q92769 488 aaKnown RBP6.35□□□□□ -1.39
PRKDC-209ENST00000540819 RPGRQ92834 1020 aaKnown RBP6.35□□□□□ -1.39
PRKDC-209ENST00000540819 C1GALT1C1Q96EU7 318 aa6.35□□□□□ -1.39
PRKDC-209ENST00000540819 TMEM169Q96HH4 297 aa6.35□□□□□ -1.39
PRKDC-209ENST00000540819 Q96M66 194 aa6.35□□□□□ -1.39
PRKDC-209ENST00000540819 CELF4Q9BZC1 486 aaKnown RBP6.35□□□□□ -1.39
PRKDC-209ENST00000540819 GTPBP4Q9BZE4 634 aaKnown RBP6.35□□□□□ -1.39
PRKDC-209ENST00000540819 RAPGEFL1Q9UHV5 662 aa6.35□□□□□ -1.39
PRKDC-209ENST00000540819 TMEM98Q9Y2Y6 226 aa6.35□□□□□ -1.39
PRKDC-209ENST00000540819 PCDHA8Q9Y5H6 950 aa6.35□□□□□ -1.39
PRKDC-209ENST00000540819 PTPDC1A2A3K4 754 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 GOLGA8AA7E2F4 631 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 GOLGA8BA8MQT2 603 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 PRRG2O14669 202 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 PYGLP06737 847 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 NCAM1P13591 858 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 GRK2P25098 689 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 LTKP29376 864 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 ICA1Q05084 483 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 BLMHQ13867 455 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 CLEC16AQ2KHT3 1053 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 NBPF8Q3BBV2 869 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 CCDC38Q502W7 563 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 TMEM132EQ6IEE7 984 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 RSPO2Q6UXX9 243 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-209ENST00000540819 PDZD4Q76G19 769 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-209ENST00000540819 TBC1D1Q86TI0 1168 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-209ENST00000540819 SPPL2CQ8IUH8 684 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 DENND1CQ8IV53 801 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 GRAMD1CQ8IYS0 662 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 C7orf61Q8IZ16 206 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 KIAA0319LQ8IZA0 1049 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 NKAIN3Q8N8D7 197 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 DNAJB8Q8NHS0 232 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 NUP133Q8WUM0 1156 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 LMBR1Q8WVP7 490 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 JADE3Q92613 823 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 BRF1Q92994 677 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 USP13Q92995 863 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-209ENST00000540819 TBC1D20Q96BZ9 403 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 UBXN10Q96LJ8 280 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 SEC62Q99442 399 aaKnown RBP6.34□□□□□ -1.39
PRKDC-209ENST00000540819 SLC26A6Q9BXS9 759 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 GPR62Q9BZJ7 368 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 MKRN2Q9H000 416 aaKnown RBP6.34□□□□□ -1.39
PRKDC-209ENST00000540819 RNF32Q9H0A6 362 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 SLC6A17Q9H1V8 727 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 BHMT2Q9H2M3 363 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 C19orf44Q9H6X5 657 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 GP6Q9HCN6 339 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 CWC25Q9NXE8 425 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-209ENST00000540819 GPRC5BQ9NZH0 403 aa6.34□□□□□ -1.39
PRKDC-209ENST00000540819 A0A087WV62 115 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 FITM1A5D6W6 292 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 KRTAP9-7A8MTY7 169 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 CD4P01730 458 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 CKMP06732 381 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 INHBBP09529 407 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 RPS6KB1P23443 525 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 PEX2P28328 305 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 SMARCA1P28370 1054 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 PRIM2P49643 509 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 LINC00310P59036 64 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 GPR85P60893 370 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 KIF22Q14807 665 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 ARHGAP44Q17R89 818 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 GAB4Q2WGN9 574 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 TBC1D10BQ4KMP7 808 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-209ENST00000540819 CCDC92Q53HC0 331 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-209ENST00000540819 RNF220Q5VTB9 566 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 KCNT2Q6UVM3 1135 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-209ENST00000540819 CAMKK1Q8N5S9 505 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 KIAA1958Q8N8K9 716 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 ADCY4Q8NFM4 1077 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 PPP1R35Q8TAP8 253 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 ARL8AQ96BM9 186 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 PAWRQ96IZ0 340 aaKnown RBP6.33□□□□□ -1.4
PRKDC-209ENST00000540819 APOL5Q9BWW9 433 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 SH3GLB2Q9NR46 395 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 SMYD2Q9NRG4 433 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 CCM2LQ9NUG4 571 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-209ENST00000540819 OXSMQ9NWU1 459 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 ARHGAP28Q9P2N2 729 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 L1RE1Q9UN81 338 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 CRYL1Q9Y2S2 319 aa6.33□□□□□ -1.4
PRKDC-209ENST00000540819 NCANO14594 1321 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 RRN3P2A6NIE6 340 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 RBAK-RBAKDNI3L0D1 243 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 EYA2O00167 538 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 SHOXO15266 292 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 TGM5O43548 720 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 B3GALT2O43825 422 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 TBC1D8O95759 1140 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 SRFP11831 508 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 ABCB4P21439 1286 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 TNFSF4P23510 183 aa6.32□□□□□ -1.4
PRKDC-209ENST00000540819 CTSWP56202 376 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms