RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CLCN3P51790 818 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 LRRC26Q2I0M4 334 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 DYMQ7RTS9 669 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 NME8Q8N427 588 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 PSPC1Q8WXF1 523 aaKnown RBP17.1■□□□□ 0.33
DDB1-216ENST00000539739 TMEM143Q96AN5 459 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 TRIM9Q9C026 710 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 FAM49AQ9H0Q0 323 aaPredicted RBP17.1■□□□□ 0.33
DDB1-216ENST00000539739 SUCLA2Q9P2R7 463 aaPredicted RBP17.1■□□□□ 0.33
DDB1-216ENST00000539739 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 AKT3Q9Y243 479 aa17.1■□□□□ 0.33
DDB1-216ENST00000539739 GTPBP6O43824 516 aaPredicted RBP17.09■□□□□ 0.33
DDB1-216ENST00000539739 HIP1RO75146 1068 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
DDB1-216ENST00000539739 CD4P01730 458 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 TLE2Q04725 743 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 GIT2Q14161 759 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 SH3RF1Q7Z6J0 888 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 KIAA0319LQ8IZA0 1049 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 LINC01465Q8N7H1 131 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 DNAJB3Q8WWF6 145 aa17.09■□□□□ 0.33
DDB1-216ENST00000539739 NPHP3-ACAD11A0A0J9YXS1 232 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 ASAP2O43150 1006 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 FAM13AO94988 1023 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 IDEP14735 1019 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 ASIC1P78348 528 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 MXD4Q14582 209 aaPredicted RBP17.08■□□□□ 0.32
DDB1-216ENST00000539739 POSTNQ15063 836 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 CNNM4Q6P4Q7 775 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 IFT74Q96LB3 600 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 REEP2Q9BRK0 252 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 HTATIP2Q9BUP3 242 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 POLR3FQ9H1D9 316 aaPredicted RBP17.08■□□□□ 0.32
DDB1-216ENST00000539739 GPRC5CQ9NQ84 441 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 KCNG1Q9UIX4 513 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 COL4A3BPQ9Y5P4 624 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 ARID2Q68CP9 1835 aa17.08■□□□□ 0.32
DDB1-216ENST00000539739 ARL2P36404 184 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
DDB1-216ENST00000539739 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
DDB1-216ENST00000539739 DRP2Q13474 957 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 CUL4BQ13620 913 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 SKOR2Q2VWA4 1001 aaPredicted RBP17.07■□□□□ 0.32
DDB1-216ENST00000539739 RPAINQ86UA6 219 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 RHPN2Q8IUC4 686 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 DNAJC19Q96DA6 116 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 ZHX3Q9H4I2 956 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 C17orf75Q9HAS0 396 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
DDB1-216ENST00000539739 TRIP12Q14669 1992 aaPredicted RBP17.07■□□□□ 0.32
DDB1-216ENST00000539739 M0QZ92 97 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 CAND2O75155 1236 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 SMC2O95347 1197 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 THPOP40225 353 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 BFSP2Q13515 415 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 PPP2R5AQ15172 486 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 PRPF31Q8WWY3 499 aaKnown RBP17.07■□□□□ 0.32
DDB1-216ENST00000539739 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
DDB1-216ENST00000539739 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 CLSTN2Q9H4D0 955 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 POLD4Q9HCU8 107 aa17.07■□□□□ 0.32
DDB1-216ENST00000539739 EVPLQ92817 2033 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 PVALEFA0A1B0GWK0 134 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 VTNP04004 478 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 CLTBP09497 229 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 CASP1P29466 404 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
DDB1-216ENST00000539739 FAAP100Q0VG06 881 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 LAMTOR4Q0VGL1 99 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 MAPK7Q13164 816 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
DDB1-216ENST00000539739 TFDP1Q14186 410 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 UNC13DQ70J99 1090 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 DAW1Q8N136 415 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 MYCT1Q8N699 235 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 SYAP1Q96A49 352 aaPredicted RBP17.06■□□□□ 0.32
DDB1-216ENST00000539739 PANK4Q9NVE7 773 aa17.06■□□□□ 0.32
DDB1-216ENST00000539739 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 PLS3P13797 630 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 GAP43P17677 238 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 GLRA2P23416 452 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 ZNF131P52739 623 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 SMTNP53814 917 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 DPYDQ12882 1025 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 PNOCQ13519 176 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 CAMK4Q16566 473 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 KLHL40Q2TBA0 621 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms