RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CSDE1O75534 798 aaKnown RBP16.91■□□□□ 0.3
USB1-203ENST00000539737 BRD1O95696 1058 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 ADD1P35611 737 aaKnown RBP16.91■□□□□ 0.3
USB1-203ENST00000539737 RBM25P49756 843 aaKnown RBP16.91■□□□□ 0.3
USB1-203ENST00000539737 ADCY7P51828 1080 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 CLLU1OSQ5K130 101 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 PPP1R18Q6NYC8 613 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 SLC24A5Q71RS6 500 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 ASCL5Q7RTU5 278 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 TMEM105Q8N8V8 129 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 MRPS27Q92552 414 aaKnown RBP16.91■□□□□ 0.3
USB1-203ENST00000539737 GJA10Q969M2 543 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 RIC8AQ9NPQ8 531 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 V9GY48 417 aaPredicted RBP16.91■□□□□ 0.3
USB1-203ENST00000539737 SMCO2A6NFE2 343 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 MAFGO15525 162 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 HBP1O60381 514 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 FOSP01100 380 aaPredicted RBP16.9■□□□□ 0.3
USB1-203ENST00000539737 ATF7P17544 494 aaPredicted RBP16.9■□□□□ 0.3
USB1-203ENST00000539737 ZNF76P36508 570 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 NEK4P51957 841 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 AK2P54819 239 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 AKAP17AQ02040 695 aaKnown RBP16.9■□□□□ 0.3
USB1-203ENST00000539737 CPLX2Q6PUV4 134 aaKnown RBP16.9■□□□□ 0.3
USB1-203ENST00000539737 KCNT2Q6UVM3 1135 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 TMEM173Q86WV6 379 aaPredicted RBP16.9■□□□□ 0.3
USB1-203ENST00000539737 CKAP2LQ8IYA6 745 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 NME8Q8N427 588 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 RASGRP4Q8TDF6 673 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
USB1-203ENST00000539737 MYH9P35579 1960 aaKnown RBP16.89■□□□□ 0.3
USB1-203ENST00000539737 IGLV3-22A0A075B6J6 115 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 CPLX1O14810 134 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 ST18O60284 1047 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 IFNAR1P17181 557 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 SREBF1P36956 1147 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 CCT2P78371 535 aaKnown RBP16.89■□□□□ 0.29
USB1-203ENST00000539737 UBE3AQ05086 875 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 HELQQ8TDG4 1101 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 RNF26Q9BY78 433 aaPredicted RBP16.89■□□□□ 0.29
USB1-203ENST00000539737 C1orf112Q9NSG2 853 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 TMEM161AQ9NX61 479 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 HCFC2Q9Y5Z7 792 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 WDR87Q6ZQQ6 2873 aa16.89■□□□□ 0.29
USB1-203ENST00000539737 FAM186AA6NE01 2351 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 WDR81Q562E7 1941 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 TMEM150BA6NC51 233 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 GPR182O15218 404 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 CDKL5O76039 1030 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 LAG3P18627 525 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 CRYBB1P53674 252 aaPredicted RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 NLRP11P59045 1033 aaKnown RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 FAM189BP81408 668 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 DRP2Q13474 957 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 UGCGQ16739 394 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 PFKFB3Q16875 520 aaPredicted RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 RARS2Q5T160 578 aaKnown RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 FAM160B1Q5W0V3 765 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 BCL7CQ8WUZ0 217 aaPredicted RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 TNPO1Q92973 898 aaKnown RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 SH2D3AQ9BRG2 576 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 SLKQ9H2G2 1235 aaPredicted RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 NCOA5Q9HCD5 579 aaKnown RBP16.88■□□□□ 0.29
USB1-203ENST00000539737 GABBR1Q9UBS5 961 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
USB1-203ENST00000539737 C2orf71A6NGG8 1288 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 MEIS3P2A8K0S8 358 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 PRPF3O43395 683 aaKnown RBP16.87■□□□□ 0.29
USB1-203ENST00000539737 CLASP2O75122 1294 aaKnown RBP16.87■□□□□ 0.29
USB1-203ENST00000539737 EPCAMP16422 314 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 STK3Q13188 491 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 NTRK3Q16288 839 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 ZNF484Q5JVG2 852 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 MIS18BP1Q6P0N0 1132 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 TMEM184AQ6ZMB5 413 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 ECHDC2Q86YB7 292 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 CCDC12Q8WUD4 166 aaPredicted RBP16.87■□□□□ 0.29
USB1-203ENST00000539737 LPPQ93052 612 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
USB1-203ENST00000539737 SLC26A6Q9BXS9 759 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 ADAMTS10Q9H324 1103 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 BARHL2Q9NY43 387 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 TPCN1Q9ULQ1 816 aa16.87■□□□□ 0.29
USB1-203ENST00000539737 IPO5O00410 1097 aaKnown RBP16.86■□□□□ 0.29
USB1-203ENST00000539737 ZNF862O60290 1169 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 B4GALT3O60512 393 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 PFKFB2O60825 505 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
USB1-203ENST00000539737 MYBP10242 640 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 RABEP1Q15276 862 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 MCTP2Q6DN12 878 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms