RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RUFY4Q6ZNE9 571 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 C1orf186Q6ZWK4 172 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 LUZP1Q86V48 1076 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 GPBP1Q86WP2 473 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 LINC01465Q8N7H1 131 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 ATP6V0A4Q9HBG4 840 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 PDLIM7Q9NR12 457 aa19.1■□□□□ 0.65
CLN6-202ENST00000538696 TANC1Q9C0D5 1861 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 MAGEB2O15479 319 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 B4GALT4O60513 344 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 CAVIN2O95810 425 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 RTP1P59025 263 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 IQCB1Q15051 598 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 PTGISQ16647 500 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 ARSHQ5FYA8 562 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 SV2BQ7L1I2 683 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 LRRC71Q8N4P6 559 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 TRIML1Q8N9V2 468 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 SLC7A3Q8WY07 619 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 TRPV6Q9H1D0 765 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 PCDHA2Q9Y5H9 948 aa19.09■□□□□ 0.65
CLN6-202ENST00000538696 MROH7Q68CQ1 1323 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 NPHP3-ACAD11A0A0J9YXS1 232 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 MYMKA6NI61 221 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 CYP2C9P11712 490 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 CLCN3P51790 818 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 MKRN4PQ13434 485 aaPredicted RBP19.08■□□□□ 0.65
CLN6-202ENST00000538696 DRP2Q13474 957 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 SERINC5Q86VE9 423 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 WNT8BQ93098 351 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 C7orf25Q9BPX7 421 aa19.08■□□□□ 0.65
CLN6-202ENST00000538696 KLRC4O43908 158 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 PQBP1O60828 265 aaKnown RBP19.07■□□□□ 0.64
CLN6-202ENST00000538696 CD4P01730 458 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 RPN1P04843 607 aaKnown RBP19.07■□□□□ 0.64
CLN6-202ENST00000538696 GUCY2CP25092 1073 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 CACNB1Q02641 598 aaPredicted RBP19.07■□□□□ 0.64
CLN6-202ENST00000538696 EFCAB12Q6NXP0 572 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 MAEAQ7L5Y9 396 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 ANKRD33Q7Z3H0 272 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 DHX40Q8IX18 779 aaKnown RBP19.07■□□□□ 0.64
CLN6-202ENST00000538696 AOPEPQ8N6M6 819 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 DHX38Q92620 1227 aaKnown RBP19.07■□□□□ 0.64
CLN6-202ENST00000538696 GSDMAQ96QA5 445 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 JPH2Q9BR39 696 aaPredicted RBP19.07■□□□□ 0.64
CLN6-202ENST00000538696 TRIM9Q9C026 710 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 GPRC5CQ9NQ84 441 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 KCND2Q9NZV8 630 aa19.07■□□□□ 0.64
CLN6-202ENST00000538696 SMIM35A0A1B0GVV1 85 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 MYL1P05976 194 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 TLE2Q04725 743 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 RAD51AP2Q09MP3 1159 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 MAPK7Q13164 816 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 PTK7Q13308 1070 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 EXOC8Q8IYI6 725 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 METTL13Q8N6R0 699 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 RETREG2Q8NC44 543 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 MCPH1Q8NEM0 835 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 TMEM143Q96AN5 459 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 TOX2Q96NM4 488 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 BPIFA3Q9BQP9 254 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 REEP2Q9BRK0 252 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 NAT10Q9H0A0 1025 aaKnown RBP19.06■□□□□ 0.64
CLN6-202ENST00000538696 SUGCTQ9HAC7 445 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 NOD1Q9Y239 953 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 ATP11BQ9Y2G3 1177 aa19.06■□□□□ 0.64
CLN6-202ENST00000538696 RSPH10B2B2RC85 870 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 TLR3O15455 904 aaKnown RBP19.05■□□□□ 0.64
CLN6-202ENST00000538696 GAS2O43903 313 aaKnown RBP19.05■□□□□ 0.64
CLN6-202ENST00000538696 HIP1RO75146 1068 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 RSPH10BP0C881 870 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 ASIC1P78348 528 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 GIT2Q14161 759 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 TRIM71Q2Q1W2 868 aaKnown RBP19.05■□□□□ 0.64
CLN6-202ENST00000538696 KMT5BQ4FZB7 885 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 FAM102BQ5T8I3 360 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 TAF2Q6P1X5 1199 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 DYMQ7RTS9 669 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 KIAA0319LQ8IZA0 1049 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 DAW1Q8N136 415 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 DDX12PQ92771 950 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 DNAJC19Q96DA6 116 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 TIPINQ9BVW5 301 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 FAM49AQ9H0Q0 323 aaPredicted RBP19.05■□□□□ 0.64
CLN6-202ENST00000538696 POLR3FQ9H1D9 316 aaPredicted RBP19.05■□□□□ 0.64
CLN6-202ENST00000538696 POLD4Q9HCU8 107 aa19.05■□□□□ 0.64
CLN6-202ENST00000538696 KRT18P05783 430 aaKnown RBP19.04■□□□□ 0.64
CLN6-202ENST00000538696 ARL2P36404 184 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 AMPD3Q01432 767 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 CNNM4Q6P4Q7 775 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 MLKLQ8NB16 471 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 ASAP3Q8TDY4 903 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 DNAJB3Q8WWF6 145 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 TCP11Q8WWU5 503 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 LRRC27Q9C0I9 530 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 RMND1Q9NWS8 449 aa19.04■□□□□ 0.64
CLN6-202ENST00000538696 CD44P16070 742 aaKnown RBP19.03■□□□□ 0.64
CLN6-202ENST00000538696 TMOD1P28289 359 aa19.03■□□□□ 0.64
CLN6-202ENST00000538696 FAAP100Q0VG06 881 aa19.03■□□□□ 0.64
CLN6-202ENST00000538696 KCNB1Q14721 858 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms