RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 HES6Q96HZ4 224 aa17.45■□□□□ 0.38
CHMP1A-202ENST00000535997 DNAJC12Q9UKB3 198 aa17.45■□□□□ 0.38
CHMP1A-202ENST00000535997 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
CHMP1A-202ENST00000535997 FRMPD4Q14CM0 1322 aa17.45■□□□□ 0.38
CHMP1A-202ENST00000535997 EBAG9O00559 213 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 MAGEA9P43362 315 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 ERVK-9P63128 1117 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 DRAP1Q14919 205 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 SLC9A9Q8IVB4 645 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 AGPAT3Q9NRZ7 376 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 TTC7AQ9ULT0 858 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 MRPL11Q9Y3B7 192 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 KRIT1O00522 736 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 PLSCR1O15162 318 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 MYBPC2Q14324 1141 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 ODR4Q5SWX8 454 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 SLC30A10Q6XR72 485 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 KDM7AQ6ZMT4 941 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 MAATS1Q7Z4T9 603 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 LRRC45Q96CN5 670 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 RANBP17Q9H2T7 1088 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 SLITRK6Q9H5Y7 841 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 AMFRQ9UKV5 643 aa17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 NOC2LQ9Y3T9 749 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-202ENST00000535997 TMEM253P0C7T8 217 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 GUCY2CP25092 1073 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 SETQ01105 290 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 HLTFQ14527 1009 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 COG2Q14746 738 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 KCTD16Q68DU8 428 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 CCDC26Q8TAB7 109 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 LNX1Q8TBB1 728 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 ZFP91Q96JP5 570 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 ZNF577Q9BSK1 485 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 SYT11Q9BT88 431 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 AP1M1Q9BXS5 423 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 IKZF4Q9H2S9 585 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 TMEM51Q9NW97 253 aa17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 DIS3Q9Y2L1 958 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-202ENST00000535997 PLA2G6O60733 806 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 ECHS1P30084 290 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 AOC3Q16853 763 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 B3GNT9Q6UX72 402 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 LRIG3Q6UXM1 1119 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 GLYCTKQ8IVS8 523 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 OLIG1Q8TAK6 271 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 SLC35G2Q8TBE7 412 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 ACER1Q8TDN7 264 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 RFFLQ8WZ73 363 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 STRA6Q9BX79 667 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 TMOD2Q9NZR1 351 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 APEX2Q9UBZ4 518 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 HMGB1P1B2RPK0 211 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 CCT5P48643 541 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 SKIDA1Q1XH10 827 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 CBWD6Q4V339 395 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 CBWD3Q5JTY5 395 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 CBWD5Q5RIA9 395 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 CCDC174Q6PII3 467 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 ATP6V1G3Q96LB4 118 aa17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 ZNF646O15015 1829 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-202ENST00000535997 RFX1P22670 979 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 CYP2J2P51589 502 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 KSR1Q8IVT5 923 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 SH2D3CQ8N5H7 860 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 CTNNBL1Q8WYA6 563 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 CNKSR1Q969H4 720 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 RIT2Q99578 217 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 GPR88Q9GZN0 384 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 DDX47Q9H0S4 455 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 UNC45AQ9H3U1 944 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 PLAAQ9Y263 795 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 SLX4Q8IY92 1834 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 NCANO14594 1321 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 IPO5O00410 1097 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 ARP10275 920 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 PPATQ06203 517 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 TMEM174Q8WUU8 243 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 C7orf43Q8WVR3 580 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 SEC14L1Q92503 715 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 TEKT3Q9BXF9 490 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 INTS2Q9H0H0 1204 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 DEFB129Q9H1M3 183 aa17.41■□□□□ 0.38
CHMP1A-202ENST00000535997 GOLGA6L10A6NI86 522 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 ZEB2O60315 1214 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 BUB1BO60566 1050 aaPredicted RBP17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 EXOC3O60645 756 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 PPP1R37O75864 691 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 TNFAIP3P21580 790 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 HSD17B3P37058 310 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 BFSP1Q12934 665 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 PTPROQ16827 1216 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 EFCAB13Q8IY85 973 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 SYCP3Q8IZU3 236 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 LXNQ9BS40 222 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 OSGEPQ9NPF4 335 aa17.4■□□□□ 0.38
CHMP1A-202ENST00000535997 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms