RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 HAS1Q92839 578 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 FAM20AQ96MK3 541 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 PPP1R16BQ96T49 567 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 NAP1L4Q99733 375 aaKnown RBP9.95□□□□□ -0.82
CHD4-204ENST00000535810 C17orf80Q9BSJ5 609 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 FTHL17Q9BXU8 183 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 SUGCTQ9HAC7 445 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
CHD4-204ENST00000535810 EVPLQ92817 2033 aa9.95□□□□□ -0.82
CHD4-204ENST00000535810 LOXHD1Q8IVV2 1947 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 ADGRA3Q8IWK6 1321 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 TMEM150BA6NC51 233 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 BTBD18B2RXH4 712 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 EML1O00423 815 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 TBX3O15119 743 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 GPR37L1O60883 481 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 GPR32O75388 356 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 STBD1O95210 358 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 VTNP04004 478 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 TRIM29Q14134 588 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 TARBP2Q15633 366 aaKnown RBP9.94□□□□□ -0.82
CHD4-204ENST00000535810 XKR3Q5GH77 459 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 RTN4RL1Q86UN2 441 aaPredicted RBP9.94□□□□□ -0.82
CHD4-204ENST00000535810 CRIPAKQ8N1N5 446 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 LRRC71Q8N4P6 559 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 BANK1Q8NDB2 785 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 NECAB3Q96P71 396 aaPredicted RBP9.94□□□□□ -0.82
CHD4-204ENST00000535810 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 OSMRQ99650 979 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 LLPHQ9BRT6 129 aaKnown RBP9.94□□□□□ -0.82
CHD4-204ENST00000535810 NIFKQ9BYG3 293 aaKnown RBP9.94□□□□□ -0.82
CHD4-204ENST00000535810 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 ERVK-5Q9HDB9 667 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 NRBP2Q9NSY0 501 aa9.94□□□□□ -0.82
CHD4-204ENST00000535810 SEPT9Q9UHD8 586 aaPredicted RBP9.94□□□□□ -0.82
CHD4-204ENST00000535810 NOC2LQ9Y3T9 749 aaKnown RBP9.94□□□□□ -0.82
CHD4-204ENST00000535810 WNT7AO00755 349 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 RPS6KA5O75582 802 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 LINC00271P0C7V0 271 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 TMOD1P28289 359 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 CRYBB1P53674 252 aaPredicted RBP9.93□□□□□ -0.82
CHD4-204ENST00000535810 PSMC5P62195 406 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 SPIRE1Q08AE8 756 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 TBC1D8BQ0IIM8 1120 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
CHD4-204ENST00000535810 MTERF2Q49AM1 385 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 EPC2Q52LR7 807 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 EFCAB12Q6NXP0 572 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 ANO5Q75V66 913 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 FAM228AQ86W67 206 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 CEP89Q96ST8 783 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 SH2D3AQ9BRG2 576 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 ADAMTS10Q9H324 1103 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 EPHX3Q9H6B9 360 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 SH2B1Q9NRF2 756 aaPredicted RBP9.93□□□□□ -0.82
CHD4-204ENST00000535810 WRAP73Q9P2S5 460 aaPredicted RBP9.93□□□□□ -0.82
CHD4-204ENST00000535810 AKT3Q9Y243 479 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 PCDHGA4Q9Y5G9 962 aa9.93□□□□□ -0.82
CHD4-204ENST00000535810 IGKV6-21A0A0C4DH24 114 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 MGEA5O60502 916 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 ZMYND10O75800 440 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 DGKIO75912 1065 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 QARSP47897 775 aaKnown RBP9.92□□□□□ -0.82
CHD4-204ENST00000535810 NLRP11P59045 1033 aaKnown RBP9.92□□□□□ -0.82
CHD4-204ENST00000535810 GUCY1B3Q02153 619 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 DRP2Q13474 957 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 RABEP1Q15276 862 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 PLA2G4FQ68DD2 849 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 FAM43BQ6ZT52 329 aaPredicted RBP9.92□□□□□ -0.82
CHD4-204ENST00000535810 NPAS4Q8IUM7 802 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 TMEM192Q8IY95 271 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 SLFN12Q8IYM2 578 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 FIBCD1Q8N539 461 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 ZNF689Q96CS4 500 aaPredicted RBP9.92□□□□□ -0.82
CHD4-204ENST00000535810 C8orf76Q96K31 380 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 ZSCAN31Q96LW9 406 aaPredicted RBP9.92□□□□□ -0.82
CHD4-204ENST00000535810 SAMD11Q96NU1 681 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 LXNQ9BS40 222 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 SCUBE2Q9NQ36 999 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 LMCD1Q9NZU5 365 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 ST3GAL5Q9UNP4 418 aa9.92□□□□□ -0.82
CHD4-204ENST00000535810 MYO7AQ13402 2215 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 DENND3A2RUS2 1198 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 H3BNC9 293 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 GPR182O15218 404 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 MARCH6O60337 910 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 NEMFO60524 1076 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 MAFO75444 373 aaPredicted RBP9.91□□□□□ -0.82
CHD4-204ENST00000535810 P4HBP07237 508 aaKnown RBP9.91□□□□□ -0.82
CHD4-204ENST00000535810 EIF4BP23588 611 aaKnown RBP9.91□□□□□ -0.82
CHD4-204ENST00000535810 SARSP49591 514 aaKnown RBP9.91□□□□□ -0.82
CHD4-204ENST00000535810 GPC3P51654 580 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 HMGN5P82970 282 aaKnown RBP9.91□□□□□ -0.82
CHD4-204ENST00000535810 BTG3Q14201 252 aaPredicted RBP9.91□□□□□ -0.82
CHD4-204ENST00000535810 EPHA7Q15375 998 aa9.91□□□□□ -0.82
CHD4-204ENST00000535810 SAFBQ15424 915 aaKnown RBP eCLIP9.91□□□□□ -0.82
CHD4-204ENST00000535810 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms