RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 PSAPP07602 524 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 GHRP10912 638 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 USP11P51784 963 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 KRT76Q01546 638 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 RBL2Q08999 1139 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 TRIM29Q14134 588 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 CCDC85BQ15834 202 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 CRTC2Q53ET0 693 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 MARCH8Q5T0T0 291 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 LRCH2Q5VUJ6 765 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.09□□□□□ -0.797e-9■■■■■ 34.2
CCDC90B-219ENST00000534753 PIK3AP1Q6ZUJ8 805 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 PLPPR4Q7Z2D5 763 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 KRT25Q7Z3Z0 450 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 CCDC83Q8IWF9 413 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 MYOCDQ8IZQ8 938 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 MAFAQ8NHW3 353 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 SEPT8Q92599 483 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 GTF3C6Q969F1 213 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 PPP1R16BQ96T49 567 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 GAS2L1Q99501 681 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 PHF20Q9BVI0 1012 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 TEKT3Q9BXF9 490 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 C22orf23Q9BZE7 217 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 GABBR1Q9UBS5 961 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 GINS2Q9Y248 185 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 PCDHA11Q9Y5I1 949 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 STK36Q9NRP7 1315 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 GBF1Q92538 1859 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 TMEM265A0A087WTH1 108 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 M0QZ92 97 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 RFXAPO00287 272 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 CCNT1O60563 726 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 CHRNA1P02708 482 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 CXCL10P02778 98 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 AMHP03971 560 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 KLRC1P26715 233 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 HOXC8P31273 242 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 CIITAP33076 1130 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 ADAM17P78536 824 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 GUCY1B3Q02153 619 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 GALNT17Q6IS24 598 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 ZNF746Q6NUN9 644 aaPredicted RBP10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 TAF2Q6P1X5 1199 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 MIER3Q7Z3K6 550 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 METTL13Q8N6R0 699 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 ARNTL2Q8WYA1 636 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 LENG9Q96B70 501 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 UNC45AQ9H3U1 944 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 BRMS1Q9HCU9 246 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 DISC1Q9NRI5 854 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 DDX25Q9UHL0 483 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 LIMCH1Q9UPQ0 1083 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 USTQ9Y2C2 406 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 PCDHA10Q9Y5I2 948 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 CDY2AQ9Y6F7 541 aa10.08□□□□□ -0.8
CCDC90B-219ENST00000534753 KAT6AQ92794 2004 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 LCHNA4D1U4 455 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 WDR64B1ANS9 1081 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 EDIL3O43854 480 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 HBP1O60381 514 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 CAND2O75155 1236 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 FDPSP14324 419 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 ATP2B1P20020 1258 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 KRT2P35908 639 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 MRPS6P82932 125 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 SKOR1P84550 965 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 NR5A1Q13285 461 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 NPY5RQ15761 445 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 PLEKHG4Q58EX7 1191 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 OXLD1Q5BKU9 147 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 IER5Q5VY09 327 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 MTHFD1LQ6UB35 978 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 SMAP1Q8IYB5 467 aaPredicted RBP10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 NSUN7Q8NE18 718 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 PHOSPHO2Q8TCD6 241 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 ATP8B4Q8TF62 1192 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 SLC5A5Q92911 643 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 C1QTNF2Q9BXJ5 285 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 IFIH1Q9BYX4 1025 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 UPF2Q9HAU5 1272 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 NOVA2Q9UNW9 492 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
CCDC90B-219ENST00000534753 IGKV6D-21A0A0A0MT36 114 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 MBLAC1A4D2B0 266 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 M0R2N6 131 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 SLC37A4O43826 429 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 EFCAB14O75071 495 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 ARHGEF15O94989 841 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 ATP4AP20648 1035 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 CD52P31358 61 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 SLC26A2P50443 739 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 RAB15P59190 212 aa10.06□□□□□ -0.8
CCDC90B-219ENST00000534753 MCCD1P59942 119 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms