RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MARCH6O60337 910 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 NEK4P51957 841 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 STK3Q13188 491 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
CSDE1-217ENST00000534699 ME3Q16798 604 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 CTC1Q2NKJ3 1217 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 LETM2Q2VYF4 491 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 LRRC43Q8N309 656 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 METTL13Q8N6R0 699 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 TUFT1Q9NNX1 390 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 CYP26B1Q9NR63 512 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 PLAGL2Q9UPG8 496 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 UPP2O95045 317 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 FDPSP14324 419 aaKnown RBP11.64□□□□□ -0.55
CSDE1-217ENST00000534699 NLRP11P59045 1033 aaKnown RBP11.64□□□□□ -0.55
CSDE1-217ENST00000534699 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
CSDE1-217ENST00000534699 ECHDC2Q86YB7 292 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 SLC7A3Q8WY07 619 aa11.64□□□□□ -0.55
CSDE1-217ENST00000534699 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
CSDE1-217ENST00000534699 DDX11L8A8MPP1 907 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 RFXAPO00287 272 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 ADAMTS3O15072 1205 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 TFDP1Q14186 410 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 CCDC85BQ15834 202 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 GPR65Q8IYL9 337 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 POP1Q99575 1024 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 OSBPL7Q9BZF2 842 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 PUF60Q9UHX1 559 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 MRPL42Q9Y6G3 142 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 LAD1O00515 517 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 FSCN2O14926 492 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 INPPL1O15357 1258 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 CCNT1O60563 726 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 POLGP54098 1239 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 NFX1Q12986 1120 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 RABEP1Q15276 862 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 FAM117BQ6P1L5 589 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 TMEM184AQ6ZMB5 413 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 PIK3AP1Q6ZUJ8 805 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 EFHBQ8N7U6 833 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 SPPL3Q8TCT6 385 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 HAS1Q92839 578 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 CERS4Q9HA82 394 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 KANSL3Q9P2N6 904 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 DBR1Q9UK59 544 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 KCNJ14Q9UNX9 436 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 GRXCR2A6NFK2 248 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 MRPL10Q7Z7H8 261 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 ZNF598Q86UK7 904 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 ERMNQ8TAM6 284 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 PPM1EQ8WY54 764 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 OSMRQ99650 979 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 SUCLA2Q9P2R7 463 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 KCNG1Q9UIX4 513 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 NOL7Q9UMY1 257 aaKnown RBP11.63□□□□□ -0.55
CSDE1-217ENST00000534699 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
CSDE1-217ENST00000534699 DGAT1O75907 488 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 SPIRE1Q08AE8 756 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 NCBP1Q09161 790 aaKnown RBP11.62□□□□□ -0.55
CSDE1-217ENST00000534699 CALCRLQ16602 461 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 UGCGQ16739 394 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 KRT40Q6A162 431 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 COLGALT1Q8NBJ5 622 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 MTMR9Q96QG7 549 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 SLC37A4O43826 429 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 NEMFO60524 1076 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 CLCN3P51790 818 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 KRT17Q04695 432 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 COASYQ13057 564 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 ADAM15Q13444 863 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
CSDE1-217ENST00000534699 KIZQ2M2Z5 673 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 DIS3L2Q8IYB7 885 aaKnown RBP11.62□□□□□ -0.55
CSDE1-217ENST00000534699 HACE1Q8IYU2 909 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 ABI1Q8IZP0 508 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 TMEM40Q8WWA1 233 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 MRPS27Q92552 414 aaKnown RBP11.62□□□□□ -0.55
CSDE1-217ENST00000534699 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 HSD17B14Q9BPX1 270 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 TMEM175Q9BSA9 504 aa11.62□□□□□ -0.55
CSDE1-217ENST00000534699 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
CSDE1-217ENST00000534699 PLXNA4Q9HCM2 1894 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 VTNP04004 478 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 PHKA2P46019 1235 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 MTERF2Q49AM1 385 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 TCEAL5Q5H9L2 206 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 ANO5Q75V66 913 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 TMCO2Q7Z6W1 182 aaPredicted RBP11.61□□□□□ -0.55
CSDE1-217ENST00000534699 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 AIFM3Q96NN9 605 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 CASD1Q96PB1 797 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 CWH43Q9H720 699 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 SSX2IPQ9Y2D8 614 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 CHMP2AO43633 222 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 MGEA5O60502 916 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 EYA4O95677 639 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms