RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ID4P47928 161 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 SESN2P58004 480 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 LINC00310P59036 64 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 CCDC178Q5BJE1 867 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 FAM26FQ5R3K3 315 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 TCERG1LQ5VWI1 586 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 RTN4RL1Q86UN2 441 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 CILP2Q8IUL8 1156 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 REXO1L1PQ8IX06 675 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 IFNL2Q8IZJ0 200 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 CNTD1Q8N815 330 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 TTC8Q8TAM2 541 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 CHMP4CQ96CF2 233 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 PAWRQ96IZ0 340 aaKnown RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 OR10A5Q9H207 317 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 ZMAT4Q9H898 229 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 ARNT2Q9HBZ2 717 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 TRHDEQ9UKU6 1024 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 C9orf118A6NHY6 69 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 GABRDO14764 452 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 SARSP49591 514 aaKnown RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 ADAM9Q13443 819 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 SKOR2Q2VWA4 1001 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 GJC2Q5T442 439 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 BROXQ5VW32 411 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 SLFN12LQ6IEE8 588 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 KIAA1841Q6NSI8 718 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 HDGFL2Q7Z4V5 671 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 ZBTB46Q86UZ6 589 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 FNIP1Q8TF40 1166 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 SSH1Q8WYL5 1049 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 FERMT2Q96AC1 680 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 DACT3Q96B18 629 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-210ENST00000534172 SLC39A2Q9NP94 309 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 FTSJ1Q9UET6 329 aa4.51□□□□□ -1.69
CSMD3-210ENST00000534172 E2F8A0AVK6 867 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 LIMS1P48059 325 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 GPR15P49685 360 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 AFF3P51826 1226 aaKnown RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 ZNF648Q5T619 568 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 ERCC4Q92889 916 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 FOXRED1Q96CU9 486 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 RAX2Q96IS3 184 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 L2HGDHQ9H9P8 463 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 KCNK12Q9HB15 430 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 KCND1Q9NSA2 647 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 ZFP69BQ9UJL9 534 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 NOB1Q9ULX3 412 aaKnown RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 MAGI1Q96QZ7 1491 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 PRPF3O43395 683 aaKnown RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 MPIG6BO95866 241 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 PRLP01236 227 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 MYL1P05976 194 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 SLC6A3Q01959 620 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 ADCY2Q08462 1091 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 MAN2A1Q16706 1144 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 WDR72Q3MJ13 1102 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 SYDE2Q5VT97 1194 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 TRMT10BQ6PF06 316 aaKnown RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 SLC39A13Q96H72 371 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 AHCYL2Q96HN2 611 aaKnown RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 CHST12Q9NRB3 414 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 KCMF1Q9P0J7 381 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 H2AFY2Q9P0M6 372 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-210ENST00000534172 CROTQ9UKG9 612 aa4.5□□□□□ -1.69
CSMD3-210ENST00000534172 RASSF10A6NK89 507 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 NPIPB6E9PJ23 425 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 NUAK1O60285 661 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 NRP2O60462 931 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 CFBP00751 764 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 MTHFD2P13995 350 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 IL13P35225 146 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 KIAA2012Q0VF49 1180 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 PRR31Q5SQ13 230 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 SYCP2LQ5T4T6 812 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 FAM102BQ5T8I3 360 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 FSTL4Q6MZW2 842 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 ESRP1Q6NXG1 681 aaKnown RBP4.49□□□□□ -1.69
CSMD3-210ENST00000534172 KANSL1Q7Z3B3 1105 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 FAM124AQ86V42 546 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 TCEAL8Q8IYN2 117 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 LINC01356Q8N9X3 169 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 NOX5Q96PH1 765 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 UCKL1Q9NWZ5 548 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 MSRAQ9UJ68 235 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 ZNF180Q9UJW8 692 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 TNKSO95271 1327 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 DBX1A6NMT0 343 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 KRT1P04264 644 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 ZNF28P17035 718 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 HLTFQ14527 1009 aaKnown RBP eCLIP4.49□□□□□ -1.69
CSMD3-210ENST00000534172 SSPNQ14714 243 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 MLC1Q15049 377 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 PRAMEF9Q5VWM5 478 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 NXNQ6DKJ4 435 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 PPP4R4Q6NUP7 873 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 APBB1IPQ7Z5R6 666 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-210ENST00000534172 KLHL36Q8N4N3 616 aa4.49□□□□□ -1.69
CSMD3-210ENST00000534172 LPPQ93052 612 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms