RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SSU72P8A0A1W2PR75 194 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 SMIM22K7EJ46 135 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 FOXD2O60548 495 aaPredicted RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 PQBP1O60828 265 aaKnown RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 CNMDO75829 334 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 PRDX5P30044 214 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 LIG3P49916 1009 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 GALK1P51570 392 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 NHLH1Q02575 133 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 RPL6Q02878 288 aaKnown RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 LMOD3Q0VAK6 560 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 PICALMQ13492 652 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 UBE4AQ14139 1066 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 SNX17Q15036 470 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 TSNAXIP1Q2TAA8 658 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 CCDC57Q2TAC2 916 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 TAF7LQ5H9L4 462 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 AKNAD1Q5T1N1 836 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 GPR142Q7Z601 462 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 PLEKHH3Q7Z736 793 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 ANKS4BQ8N8V4 417 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 DTWD2Q8NBA8 298 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 DNAJB8Q8NHS0 232 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 NPLOC4Q8TAT6 608 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 LPAR1Q92633 364 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 TSR2Q969E8 191 aaKnown RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 ACSF2Q96CM8 615 aaPredicted RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 HOOK2Q96ED9 719 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 EDC3Q96F86 508 aaKnown RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 ASB16Q96NS5 453 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 UIMC1Q96RL1 719 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.73□□□□□ -1.812e-7■□□□□ 9.5
CHMP4A-208ENST00000534106 PAGR1Q9BTK6 254 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 NKX2-4Q9H2Z4 354 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 PNNQ9H307 717 aaKnown RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 ZNF552Q9H707 407 aaPredicted RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 CERS4Q9HA82 394 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 SIRT5Q9NXA8 310 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 MORF4L1Q9UBU8 362 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 ZMYM5Q9UJ78 669 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 GNEQ9Y223 722 aaKnown RBP3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 ATRNL1Q5VV63 1379 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 DMDP11532 3685 aa3.73□□□□□ -1.81
CHMP4A-208ENST00000534106 OTOFQ9HC10 1997 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 C5orf42Q9H799 3197 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 DOCK3Q8IZD9 2030 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 OR14I1A6ND48 311 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 EPOPA6NHQ4 379 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 UPK3BL1B0FP48 263 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 UPK3BL2E5RIL1 263 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 DNM1LO00429 736 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 PSPNO60542 156 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 CTNND1O60716 968 aaKnown RBP3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 LRRN2O75325 713 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 BPNT1O95861 308 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 RAG1P15918 1043 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 RPL10P27635 214 aaKnown RBP3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 RGS2P41220 211 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 GCLCP48506 637 aaPredicted RBP3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 YARSP54577 528 aaKnown RBP3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 HERVK_113P62684 666 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 SRSF3P84103 164 aaKnown RBP3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 FPGSQ05932 587 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 LRRC41Q15345 812 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 NR0B2Q15466 257 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 SLC14A2Q15849 920 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 GAB4Q2WGN9 574 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 TIGD5Q53EQ6 642 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 TMEM240Q5SV17 173 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 BEND3Q5T5X7 828 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 ADGRF1Q5T601 910 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 WDR78Q5VTH9 848 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 CCDC30Q5VVM6 783 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 ERICH6BQ5W0A0 696 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 AGMOQ6ZNB7 445 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 ZNF365Q70YC5 407 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 TBC1D22AQ8WUA7 517 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 CYB5D2Q8WUJ1 264 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 RUNDC1Q96C34 613 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 KAZALD1Q96I82 304 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 ADAM30Q9UKF2 790 aa3.72□□□□□ -1.81
CHMP4A-208ENST00000534106 DDX60LQ5H9U9 1706 aaKnown RBP3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 PI4K2BG5E9Z4 385 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 APAF1O14727 1248 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 KIAA0355O15063 1070 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 PGK1P00558 417 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 CLTBP09497 229 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 CSF2RAP15509 400 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 GNA15P30679 374 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 MAPK4P31152 587 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 IRX3P78415 501 aaPredicted RBP3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 CAVIN4Q5BKX8 364 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 FAM47AQ5JRC9 791 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 METTL24Q5JXM2 366 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 MFSD14CQ5VZR4 134 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 DBX2Q6ZNG2 339 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 CCAR1Q8IX12 1150 aaKnown RBP3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 PHACTR4Q8IZ21 702 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 ARRDC4Q8NCT1 418 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms