RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 MRPS6P82932 125 aaKnown RBP15.62■□□□□ 0.09
CMTM1-218ENST00000533915 ODR4Q5SWX8 454 aa15.62■□□□□ 0.09
CMTM1-218ENST00000533915 C1orf186Q6ZWK4 172 aa15.62■□□□□ 0.09
CMTM1-218ENST00000533915 TMEM199Q8N511 208 aa15.62■□□□□ 0.09
CMTM1-218ENST00000533915 CTAGE1Q96RT6 745 aa15.62■□□□□ 0.09
CMTM1-218ENST00000533915 LBHD1Q9BQE6 289 aaPredicted RBP15.62■□□□□ 0.09
CMTM1-218ENST00000533915 C17orf75Q9HAS0 396 aa15.62■□□□□ 0.09
CMTM1-218ENST00000533915 ODF2LQ9ULJ1 636 aa15.62■□□□□ 0.09
CMTM1-218ENST00000533915 ALPK3Q96L96 1907 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 A0A087X0B3 334 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 KINO60870 393 aaKnown RBP15.61■□□□□ 0.09
CMTM1-218ENST00000533915 MYL1P05976 194 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 RFC2P35250 354 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 E2F4Q16254 413 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 TRIM71Q2Q1W2 868 aaKnown RBP15.61■□□□□ 0.09
CMTM1-218ENST00000533915 NAALADL2Q58DX5 795 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 FAM43BQ6ZT52 329 aaPredicted RBP15.61■□□□□ 0.09
CMTM1-218ENST00000533915 LRRC8DQ7L1W4 858 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 ZNF410Q86VK4 478 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 RHPN2Q8IUC4 686 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 LINC01465Q8N7H1 131 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 CNNM3Q8NE01 707 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 PRPF31Q8WWY3 499 aaKnown RBP15.61■□□□□ 0.09
CMTM1-218ENST00000533915 NLRP7Q8WX94 980 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 DHX38Q92620 1227 aaKnown RBP15.61■□□□□ 0.09
CMTM1-218ENST00000533915 TMEM143Q96AN5 459 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 CELF4Q9BZC1 486 aaKnown RBP15.61■□□□□ 0.09
CMTM1-218ENST00000533915 PPP1R12CQ9BZL4 782 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 INO80BQ9C086 356 aaPredicted RBP15.61■□□□□ 0.09
CMTM1-218ENST00000533915 COL4A3BPQ9Y5P4 624 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 TRPV2Q9Y5S1 764 aa15.61■□□□□ 0.09
CMTM1-218ENST00000533915 ZNF202O95125 648 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 VTNP04004 478 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 PTMSP20962 102 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 SCP2P22307 547 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 ARL2P36404 184 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 CRYBB1P53674 252 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-218ENST00000533915 SMTNP53814 917 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 MLLT1Q03111 559 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-218ENST00000533915 LAMTOR4Q0VGL1 99 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 DMP1Q13316 513 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-218ENST00000533915 FAM26DQ5JW98 314 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 ZNF618Q5T7W0 954 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 MAEAQ7L5Y9 396 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 RPUSD2Q8IZ73 545 aaKnown RBP15.6■□□□□ 0.09
CMTM1-218ENST00000533915 ZBTB10Q96DT7 871 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 RUSC1Q9BVN2 902 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 GCOM2Q9BZD3 368 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-218ENST00000533915 POLR3FQ9H1D9 316 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-218ENST00000533915 XPNPEP1Q9NQW7 623 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 KBTBD4Q9NVX7 518 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 LARSQ9P2J5 1176 aaKnown RBP15.6■□□□□ 0.09
CMTM1-218ENST00000533915 SQORQ9Y6N5 450 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 PHLPP2Q6ZVD8 1323 aa15.6■□□□□ 0.09
CMTM1-218ENST00000533915 MYH11P35749 1972 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 TRIM43BA6NCK2 446 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 H0YCG3 227 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 HIP1RO75146 1068 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 FAM13AO94988 1023 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 CTSHP09668 335 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 IQCF3P0C7M6 154 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 CYP2C18P33260 490 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 ABCD1P33897 745 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 PHKA2P46019 1235 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 NLRP11P59045 1033 aaKnown RBP15.59■□□□□ 0.09
CMTM1-218ENST00000533915 POU5F1BQ06416 359 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 MFSD5Q6N075 450 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 SH3RF1Q7Z6J0 888 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 ZBTB8OSQ8IWT0 167 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 SLC17A8Q8NDX2 589 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 DDX12PQ92771 950 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 CCDC47Q96A33 483 aaKnown RBP15.59■□□□□ 0.09
CMTM1-218ENST00000533915 TRIM43Q96BQ3 446 aaPredicted RBP15.59■□□□□ 0.09
CMTM1-218ENST00000533915 NLRP4Q96MN2 994 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 TIGD1Q96MW7 591 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 C2orf40Q9H1Z8 148 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 GOLPH3LQ9H4A5 285 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 SERTAD1Q9UHV2 236 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 GINS2Q9Y248 185 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 CDY2AQ9Y6F7 541 aa15.59■□□□□ 0.09
CMTM1-218ENST00000533915 ACTN4O43707 911 aaKnown RBP15.58■□□□□ 0.08
CMTM1-218ENST00000533915 GADD45BO75293 160 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-218ENST00000533915 PFKMP08237 780 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 SRGAP2CP0DJJ0 459 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 GAP43P17677 238 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 NAMPTP43490 491 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 GPC3P51654 580 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 NCBP1Q09161 790 aaKnown RBP15.58■□□□□ 0.08
CMTM1-218ENST00000533915 TMEM62Q0P6H9 643 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 PPIGQ13427 754 aaKnown RBP eCLIP15.58■□□□□ 0.08
CMTM1-218ENST00000533915 MKRN4PQ13434 485 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-218ENST00000533915 PCBP1Q15365 356 aaKnown RBP eCLIP15.58■□□□□ 0.08
CMTM1-218ENST00000533915 KIZQ2M2Z5 673 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 LONRF3Q496Y0 759 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 ARSHQ5FYA8 562 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 KRBA2Q6ZNG9 492 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 CCDC65Q8IXS2 484 aa15.58■□□□□ 0.08
CMTM1-218ENST00000533915 FMR1NBQ8N0W7 255 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-218ENST00000533915 DEPTORQ8TB45 409 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms