RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 CCT6AP40227 531 aaKnown RBP16.59■□□□□ 0.25
PUF60-221ENST00000533162 NCBP1Q09161 790 aaKnown RBP16.59■□□□□ 0.25
PUF60-221ENST00000533162 TFDP1Q14186 410 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 NBR1Q14596 966 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 EMC2Q15006 297 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 CATSPER3Q86XQ3 398 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 NPAS4Q8IUM7 802 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 C4orf32Q8N8J7 132 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 GUCD1Q96NT3 240 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 SAMD11Q96NU1 681 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
PUF60-221ENST00000533162 OSBPL7Q9BZF2 842 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 RGS18Q9NS28 235 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 DACT1Q9NYF0 836 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 DBR1Q9UK59 544 aaKnown RBP16.59■□□□□ 0.25
PUF60-221ENST00000533162 PCDHB7Q9Y5E2 793 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 COL4A3BPQ9Y5P4 624 aa16.59■□□□□ 0.25
PUF60-221ENST00000533162 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.24
PUF60-221ENST00000533162 SARSP49591 514 aaKnown RBP16.58■□□□□ 0.24
PUF60-221ENST00000533162 HTRA4P83105 476 aaPredicted RBP16.58■□□□□ 0.24
PUF60-221ENST00000533162 SLC24A5Q71RS6 500 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 TMCO2Q7Z6W1 182 aaPredicted RBP16.58■□□□□ 0.24
PUF60-221ENST00000533162 KCTD17Q8N5Z5 321 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 MCPH1Q8NEM0 835 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 TMEM40Q8WWA1 233 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 NLRP4Q96MN2 994 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 ADAM2Q99965 735 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 ZSCAN16Q9H4T2 348 aaPredicted RBP16.58■□□□□ 0.24
PUF60-221ENST00000533162 CHST12Q9NRB3 414 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 RWDD3Q9Y3V2 267 aa16.58■□□□□ 0.24
PUF60-221ENST00000533162 A0A087WZ62 844 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 ARHGEF35A5YM69 484 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 SKIP12755 728 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 SYT1P21579 422 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 PHKA2P46019 1235 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 RARRES1P49788 294 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 ATP2C1P98194 919 aaPredicted RBP16.57■□□□□ 0.24
PUF60-221ENST00000533162 TAP1Q03518 808 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 PCBP1Q15365 356 aaKnown RBP eCLIP16.57■□□□□ 0.24
PUF60-221ENST00000533162 SRGAP1Q7Z6B7 1085 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 FAM228AQ86W67 206 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 FIBCD1Q8N539 461 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 IGSF22Q8N9C0 903 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 SNX29Q8TEQ0 813 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 PIGOQ8TEQ8 1089 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 PRPF31Q8WWY3 499 aaKnown RBP16.57■□□□□ 0.24
PUF60-221ENST00000533162 MYLIPQ8WY64 445 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 ARNTL2Q8WYA1 636 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 TMEM143Q96AN5 459 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 FDXACB1Q9BRP7 624 aaPredicted RBP16.57■□□□□ 0.24
PUF60-221ENST00000533162 PRDM12Q9H4Q4 367 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 DNM3Q9UQ16 869 aa16.57■□□□□ 0.24
PUF60-221ENST00000533162 LAMA2P24043 3122 aaKnown RBP16.57■□□□□ 0.24
PUF60-221ENST00000533162 HOXA2O43364 376 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 MED24O75448 989 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 SRGAP2CP0DJJ0 459 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 IGFBP4P22692 258 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 LAMTOR4Q0VGL1 99 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 DRP2Q13474 957 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 CATSPER4Q7RTX7 472 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 FERMT3Q86UX7 667 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 ZNF579Q8NAF0 562 aaKnown RBP16.56■□□□□ 0.24
PUF60-221ENST00000533162 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
PUF60-221ENST00000533162 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 AK8Q96MA6 479 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 NT5C3AQ9H0P0 336 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 TMX1Q9H3N1 280 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 ELAC1Q9H777 363 aaKnown RBP16.56■□□□□ 0.24
PUF60-221ENST00000533162 KIAA1024Q9UPX6 916 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 SZT2Q5T011 3432 aa16.56■□□□□ 0.24
PUF60-221ENST00000533162 LINC01553A4QN01 128 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 ZBTB39O15060 712 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 SLC26A4O43511 780 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 STX6O43752 255 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 ERVK-21P61565 698 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 POU5F1BQ06416 359 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 BTG3Q14201 252 aaPredicted RBP16.55■□□□□ 0.24
PUF60-221ENST00000533162 POTEGQ6S5H5 508 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 RTN4RL1Q86UN2 441 aaPredicted RBP16.55■□□□□ 0.24
PUF60-221ENST00000533162 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
PUF60-221ENST00000533162 ZNF668Q96K58 619 aaPredicted RBP16.55■□□□□ 0.24
PUF60-221ENST00000533162 BMP2KQ9NSY1 1161 aaPredicted RBP16.55■□□□□ 0.24
PUF60-221ENST00000533162 TET1Q8NFU7 2136 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 VWA3AA6NCI4 1184 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 USO1O60763 962 aaKnown RBP16.54■□□□□ 0.24
PUF60-221ENST00000533162 DGKIO75912 1065 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 IBSPP21815 317 aaPredicted RBP16.54■□□□□ 0.24
PUF60-221ENST00000533162 CMTR2Q8IYT2 770 aaKnown RBP16.54■□□□□ 0.24
PUF60-221ENST00000533162 ABI1Q8IZP0 508 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 MAFAQ8NHW3 353 aaPredicted RBP16.54■□□□□ 0.24
PUF60-221ENST00000533162 RSPH1Q8WYR4 309 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 CERS4Q9HA82 394 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
PUF60-221ENST00000533162 TMEM161AQ9NX61 479 aa16.54■□□□□ 0.24
PUF60-221ENST00000533162 ADGRA3Q8IWK6 1321 aa16.53■□□□□ 0.24
PUF60-221ENST00000533162 LCHNA4D1U4 455 aa16.53■□□□□ 0.24
PUF60-221ENST00000533162 C9IYK1 514 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms