RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 PPP2R5AQ15172 486 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 RPS6KA1Q15418 735 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 FAM153CQ494X1 144 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 TTMPQ5BVD1 217 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 LEKR1Q6ZMV7 388 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 METTL13Q8N6R0 699 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 EIF1ADQ8N9N8 165 aaKnown RBP9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 NEK9Q8TD19 979 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 ZBED3Q96IU2 234 aaPredicted RBP9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 ZFP91Q96JP5 570 aaPredicted RBP9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 KRT12Q99456 494 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 PSMD1Q99460 953 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 RIT2Q99578 217 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 MXRA8Q9BRK3 442 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 LXNQ9BS40 222 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 ZNF577Q9BSK1 485 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 TEKT3Q9BXF9 490 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 EHMT1Q9H9B1 1298 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 EPB41L5Q9HCM4 733 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 TMOD2Q9NZR1 351 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 COL20A1Q9P218 1284 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 FAM153AQ9UHL3 310 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 FEM1BQ9UK73 627 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 DAAM1Q9Y4D1 1078 aa9.04□□□□□ -0.96
TRIM53BP-201ENST00000532912 ESYT3A0FGR9 886 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 GOLGA8KD6RF30 607 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 IPO5O00410 1097 aaKnown RBP9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 KCNK3O14649 394 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 C21orf2O43822 256 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 IVLP07476 585 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 H2AFZP0C0S5 128 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 DNA2P51530 1060 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 GUCY2DQ02846 1103 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 PPATQ06203 517 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 TRADDQ15628 312 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 IFI16Q16666 785 aaKnown RBP9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 H2AFVQ71UI9 128 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 FAM83AQ86UY5 434 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 NT5DC3Q86UY8 548 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 CD302Q8IX05 232 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 FAM178BQ8IXR5 827 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 FAM76AQ8TAV0 307 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 CLEC4DQ8WXI8 215 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 ARL8AQ96BM9 186 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 HES6Q96HZ4 224 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 CALR3Q96L12 384 aaKnown RBP9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 ZIM3Q96PE6 472 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 TMEM39BQ9GZU3 492 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 SUCLA2Q9P2R7 463 aaPredicted RBP9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 DNAJC12Q9UKB3 198 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 NFU1Q9UMS0 254 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 FER1L6Q2WGJ9 1857 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 GRIN2DO15399 1336 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 IGSF9BQ9UPX0 1349 aa9.03□□□□□ -0.96
TRIM53BP-201ENST00000532912 GOLGA6CA6NDK9 693 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 HIP1RO75146 1068 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 ICAM1P05362 532 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 GOLGA6DP0CG33 693 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 TRIM49P0CI25 452 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 TRIM49CP0CI26 452 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 MAPTP10636 758 aaKnown RBP9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 HSPA9P38646 679 aaKnown RBP9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 GALCP54803 685 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 ERVK-9P63128 1117 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 TNNC1P63316 161 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 SKOR1P84550 965 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 BFSP1Q12934 665 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 PAK2Q13177 524 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 SF3B2Q13435 895 aaKnown RBP9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 DRAP1Q14919 205 aaPredicted RBP9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 DLGAP5Q15398 846 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 ODR4Q5SWX8 454 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 NIPA1Q7RTP0 329 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 C12orf56Q8IXR9 622 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 IL31RAQ8NI17 732 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 INTS2Q9H0H0 1204 aaKnown RBP9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 ISCUQ9H1K1 167 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 GOLGA6AQ9NYA3 693 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 CWC15Q9P013 229 aaKnown RBP9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.96
TRIM53BP-201ENST00000532912 ZNF233A6NK53 670 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 DDX3YO15523 660 aaKnown RBP9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 OPA1O60313 960 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 RAD17O75943 681 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 LYPLA2O95372 231 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 TMEM253P0C7T8 217 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 LMNB1P20700 586 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 INPP5BP32019 993 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 CYP2J2P51589 502 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 RNASE9P60153 205 aaKnown RBP9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 POU5F1Q01860 360 aaKnown RBP9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 SPP2Q13103 211 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 PPFIA1Q13136 1202 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 ITGB3BPQ13352 177 aaPredicted RBP9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 KIF22Q14807 665 aa9.02□□□□□ -0.97
TRIM53BP-201ENST00000532912 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms