RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	THNSL1	Q8IYQ7	743 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ABI1	Q8IZP0	508 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	KLHL23	Q8NBE8	558 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	POF1B	Q8WVV4	589 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LINC01599	Q8WXQ3	324 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PHKB	Q93100	1093 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	OSMR	Q99650	979 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ADAM2	Q99965	735 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	C22orf23	Q9BZE7	217 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ATP6V0A4	Q9HBG4	840 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CD320	Q9NPF0	282 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	NRBP2	Q9NSY0	501 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	GABBR1	Q9UBS5	961 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CD207	Q9UJ71	328 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	AKT3	Q9Y243	479 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	NOC2L	Q9Y3T9	749 aa	Known RBP	10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CHD7	Q9P2D1	2997 aa		10.89	□□□□□ -0.67
PPFIA1-223	ENST00000532793	HOXA2	O43364	376 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	GAS7	O60861	476 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PPFIA3	O75145	1194 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	C22orf31	O95567	290 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ITGB1	P05556	798 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RPS6KB1	P23443	525 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SFN	P31947	248 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	UBE3A	Q05086	875 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ZP2	Q05996	745 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SMAD4	Q13485	552 aa	Known RBP	10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	KIZ	Q2M2Z5	673 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CPLX2	Q6PUV4	134 aa	Known RBP	10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	KIAA0319L	Q8IZA0	1049 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TEKT3	Q9BXF9	490 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ERVK-5	Q9HDB9	667 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RGS18	Q9NS28	235 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ST3GAL5	Q9UNP4	418 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SNX14	Q9Y5W7	946 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	NID2	Q14112	1375 aa		10.88	□□□□□ -0.67
PPFIA1-223	ENST00000532793	VCAN	P13611	3396 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	DHX15	O43143	795 aa	Known RBP	10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	MBTPS2	O43462	519 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CHMP2A	O43633	222 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	VTN	P04004	478 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	OAT	P04181	439 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LINC00271	P0C7V0	271 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LAG3	P18627	525 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	NRIP1	P48552	1158 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	GATM	P50440	423 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	JAK3	P52333	1124 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CCT2	P78371	535 aa	Known RBP	10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SSRP1	Q08945	709 aa	Known RBP	10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	COL19A1	Q14993	1142 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SMAD2	Q15796	467 aa	Known RBP	10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CTC1	Q2NKJ3	1217 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LRCH2	Q5VUJ6	765 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	EFCAB12	Q6NXP0	572 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RBM23	Q86U06	439 aa	Known RBP	10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SPPL3	Q8TCT6	385 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RASGRP4	Q8TDF6	673 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TMEM40	Q8WWA1	233 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TMX1	Q9H3N1	280 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TLE6	Q9H808	572 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SH3GLB2	Q9NR46	395 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TLR9	Q9NR96	1032 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	DISC1	Q9NRI5	854 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TMEM161A	Q9NX61	479 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	VPS54	Q9P1Q0	977 aa		10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PUF60	Q9UHX1	559 aa	Known RBP	10.87	□□□□□ -0.67
PPFIA1-223	ENST00000532793		C9IYK1	514 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TBX10	O75333	385 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	IFNAR1	P17181	557 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CIITA	P33076	1130 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LTBR	P36941	435 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	USP11	P51784	963 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CLCN3	P51790	818 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	NLRP11	P59045	1033 aa	Known RBP	10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TBC1D8B	Q0IIM8	1120 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ADAM15	Q13444	863 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	BMS1	Q14692	1282 aa	Known RBP	10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PKN1	Q16512	942 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PDE12	Q6L8Q7	609 aa	Known RBP	10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	MIER3	Q7Z3K6	550 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	FAM228A	Q86W67	206 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	FBXL16	Q8N461	479 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	EFHB	Q8N7U6	833 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	NLRP7	Q8WX94	980 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CRYGN	Q8WXF5	182 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	KCNB2	Q92953	911 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RIT2	Q99578	217 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ELAC1	Q9H777	363 aa	Known RBP	10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CDHR5	Q9HBB8	845 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CYP46A1	Q9Y6A2	500 aa		10.86	□□□□□ -0.67
PPFIA1-223	ENST00000532793	MYO7A	Q13402	2215 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LOC100996750	A0A140TA64	210 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ZBTB42	B2RXF5	422 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LINC01565	O15544	149 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	MGEA5	O60502	916 aa		10.85	□□□□□ -0.67

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