RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TAF4BQ92750 862 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 TUBGCP5Q96RT8 1024 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 MYD88Q99836 296 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 DDX23Q9BUQ8 820 aaKnown RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 SLC26A6Q9BXS9 759 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 ASCC2Q9H1I8 757 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 BHMT2Q9H2M3 363 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 DENND2DQ9H6A0 471 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 CD2APQ9Y5K6 639 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 CACNA1SQ13698 1873 aa8.77□□□□□ -1
CSDE1-214ENST00000530886 PASKQ96RG2 1323 aa8.77□□□□□ -1
CSDE1-214ENST00000530886 KCPQ6ZWJ8 1503 aa8.77□□□□□ -1
CSDE1-214ENST00000530886 TCP11X1B4DZS4 312 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 ITGA6P23229 1130 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 PAX3P23760 479 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 VARSP26640 1264 aaKnown RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 POLGP54098 1239 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 DENND2CQ68D51 928 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 LRRC74BQ6ZQY2 392 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 CRACR2BQ8N4Y2 399 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 XAGE3Q8WTP9 111 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 TBC1D10AQ9BXI6 508 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 BLZF1Q9H2G9 400 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 AZI2Q9H6S1 392 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 TIMMDC1Q9NPL8 285 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 USP40Q9NVE5 1235 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 STXBP5LQ9Y2K9 1186 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 UTP11Q9Y3A2 253 aaKnown RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 BAZ2AQ9UIF9 1905 aaKnown RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 ADAMTS3O15072 1205 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 PLSCR1O15162 318 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 GPAA1O43292 621 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 BUB1O43683 1085 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 SPATA31D3P0C874 917 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 RTP1P59025 263 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 IFI35P80217 286 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 KLRC3Q07444 240 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 RPS6KA1Q15418 735 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 C10orf76Q5T2E6 689 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 C4orf50Q6ZRC1 276 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 SPATA31D4Q6ZUB0 917 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 TRIM22Q8IYM9 498 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 ANKS1AQ92625 1134 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 TEKT1Q969V4 418 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 CLMNQ96JQ2 1002 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 CNOT6LQ96LI5 555 aaKnown RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 ZNF184Q99676 751 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 RHBDL2Q9NX52 303 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 STX18Q9P2W9 335 aaKnown RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 BIN2Q9UBW5 565 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 INTUQ9ULD6 942 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 UMODL1Q5DID0 1318 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 CCNE1P24864 410 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 RGS2P41220 211 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 GRM2Q14416 872 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 DUPD1Q68J44 220 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 DUS1LQ6P1R4 473 aaKnown RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 SDR16C5Q8N3Y7 309 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 MAGEB18Q96M61 343 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 MYL10Q9BUA6 226 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 POLR3CQ9BUI4 534 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-214ENST00000530886 GGT7Q9UJ14 662 aa8.77□□□□□ -1.01
CSDE1-214ENST00000530886 MAGEB2O15479 319 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 TROVE2P10155 538 aaKnown RBP eCLIP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 VAV1P15498 845 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 MARK3P27448 753 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 CLCN2P51788 898 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 GFPT1Q06210 699 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 PRPF4BQ13523 1007 aaKnown RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 ALX1Q15699 326 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 BCL2A1Q16548 175 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 WDR72Q3MJ13 1102 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 COPS6Q7L5N1 327 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 ATP11CQ8NB49 1132 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 TTC8Q8TAM2 541 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 NOC4LQ9BVI4 516 aaKnown RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 MYLK2Q9H1R3 596 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 EPB41L4AQ9HCS5 686 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 CABP5Q9NP86 173 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 ETNK2Q9NVF9 386 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 STARD13Q9Y3M8 1113 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 TMEM247A6NEH6 219 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 FAM187AA6NFU0 413 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 LRRC53A6NM62 1247 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 FTCDO95954 541 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 SERPING1P05155 500 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 T-ENOLP0DO92 83 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 PORP16435 677 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 HOXD12P35452 270 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 RPL26P61254 145 aaKnown RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 TCIRG1Q13488 830 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 AUHQ13825 339 aaKnown RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 TTLL12Q14166 644 aaPredicted RBP8.76□□□□□ -1.01
CSDE1-214ENST00000530886 ZNF568Q3ZCX4 644 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 FOXR2Q6PJQ5 311 aa8.76□□□□□ -1.01
CSDE1-214ENST00000530886 ZC3H18Q86VM9 953 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms