RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 SCLT1Q96NL6 688 aa16.69■□□□□ 0.26
PPFIA1-216ENST00000530746 POLR3CQ9BUI4 534 aaPredicted RBP16.69■□□□□ 0.26
PPFIA1-216ENST00000530746 CERS4Q9HA82 394 aa16.69■□□□□ 0.26
PPFIA1-216ENST00000530746 TUFT1Q9NNX1 390 aa16.69■□□□□ 0.26
PPFIA1-216ENST00000530746 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.69■□□□□ 0.26
PPFIA1-216ENST00000530746 ANKEF1Q9NU02 776 aa16.69■□□□□ 0.26
PPFIA1-216ENST00000530746 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
PPFIA1-216ENST00000530746 GAS2O43903 313 aaKnown RBP16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 MGEA5O60502 916 aa16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 XRCC6P12956 609 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 DARSP14868 501 aaKnown RBP16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 PDCP20941 246 aa16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 RHPN2Q8IUC4 686 aa16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 CRIPAKQ8N1N5 446 aa16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 ARNTL2Q8WYA1 636 aa16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 COL4A4P53420 1690 aaPredicted RBP16.68■□□□□ 0.26
PPFIA1-216ENST00000530746 DENND3A2RUS2 1198 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 MED24O75448 989 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 RPA1P27694 616 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 PRPHP41219 470 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 RARRES1P49788 294 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 PDIA5Q14554 519 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 EMC2Q15006 297 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 ZNF410Q86VK4 478 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 SNX21Q969T3 373 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 CCDC43Q96MW1 224 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 MTRQ99707 1265 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 ADAM2Q99965 735 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 GCOM2Q9BZD3 368 aaPredicted RBP16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 RGS18Q9NS28 235 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 C1orf112Q9NSG2 853 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 FNDC1Q4ZHG4 1894 aaPredicted RBP16.67■□□□□ 0.26
PPFIA1-216ENST00000530746 A0A087WZ62 844 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 EPOPA6NHQ4 379 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 DGAT1O75907 488 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 STAG3L1P0CL83 205 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 SARSP49591 514 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 ERVK-21P61565 698 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 ADGRE1Q14246 886 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 HAUS3Q68CZ6 603 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 SLC24A5Q71RS6 500 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 NPAS4Q8IUM7 802 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 KSR1Q8IVT5 923 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 IGSF22Q8N9C0 903 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 MAFAQ8NHW3 353 aaPredicted RBP16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 PIGOQ8TEQ8 1089 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 TCP11Q8WWU5 503 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 PRPF31Q8WWY3 499 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 TMEM143Q96AN5 459 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 NACC1Q96RE7 527 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 FDXACB1Q9BRP7 624 aaPredicted RBP16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 RAB34Q9BZG1 259 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 INO80BQ9C086 356 aaPredicted RBP16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 RC3H2Q9HBD1 1191 aaKnown RBP16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 LRWD1Q9UFC0 647 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 REV3LO60673 3130 aa16.66■□□□□ 0.26
PPFIA1-216ENST00000530746 A0A087WWV3 80 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 C9IYK1 514 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 RFXAPO00287 272 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 CSDE1O75534 798 aaKnown RBP16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 DGKIO75912 1065 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 MUTP22033 750 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 ATP2C1P98194 919 aaPredicted RBP16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 DSC3Q14574 896 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 DTHD1Q6ZMT9 781 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 BRAPQ7Z569 592 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 ZNF689Q96CS4 500 aaPredicted RBP16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 NLRP4Q96MN2 994 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 ATP6V0A4Q9HBG4 840 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 XPNPEP1Q9NQW7 623 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 KIAA1671Q9BY89 1806 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 ADGRA3Q8IWK6 1321 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 UNC80Q8N2C7 3258 aa16.65■□□□□ 0.26
PPFIA1-216ENST00000530746 PRRC2BQ5JSZ5 2229 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 VPS37CA5D8V6 355 aaPredicted RBP16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 ASAP2O43150 1006 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 ZSCAN20P17040 1043 aaPredicted RBP16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 SYT1P21579 422 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 FGFR4P22455 802 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 IGFBP4P22692 258 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 SFPQP23246 707 aaKnown RBP eCLIP16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 CCT6AP40227 531 aaKnown RBP16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 LAMTOR4Q0VGL1 99 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 IL17AQ16552 155 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 FIBCD1Q8N539 461 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 SAMD11Q96NU1 681 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 C17orf80Q9BSJ5 609 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 IFT122Q9HBG6 1241 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 MTUS1Q9ULD2 1270 aa16.64■□□□□ 0.25
PPFIA1-216ENST00000530746 LRFN2Q9ULH4 789 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms