RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 PIGOQ8TEQ8 1089 aa18.79■□□□□ 0.6
HIF3A-211ENST00000528563 ZNF668Q96K58 619 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-211ENST00000528563 LRWD1Q9UFC0 647 aa18.79■□□□□ 0.6
HIF3A-211ENST00000528563 VPS37CA5D8V6 355 aaPredicted RBP18.78■□□□□ 0.6
HIF3A-211ENST00000528563 UPP2O95045 317 aa18.78■□□□□ 0.6
HIF3A-211ENST00000528563 RARRES1P49788 294 aa18.78■□□□□ 0.6
HIF3A-211ENST00000528563 SP7Q8TDD2 431 aaPredicted RBP18.78■□□□□ 0.6
HIF3A-211ENST00000528563 PRPF31Q8WWY3 499 aaKnown RBP18.78■□□□□ 0.6
HIF3A-211ENST00000528563 MYLIPQ8WY64 445 aa18.78■□□□□ 0.6
HIF3A-211ENST00000528563 TMEM143Q96AN5 459 aa18.78■□□□□ 0.6
HIF3A-211ENST00000528563 NACC1Q96RE7 527 aa18.78■□□□□ 0.6
HIF3A-211ENST00000528563 FOXD4L1Q9NU39 408 aa18.78■□□□□ 0.6
HIF3A-211ENST00000528563 CHD7Q9P2D1 2997 aa18.78■□□□□ 0.6
HIF3A-211ENST00000528563 A0A087WZ62 844 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 GAS2O43903 313 aaKnown RBP18.77■□□□□ 0.6
HIF3A-211ENST00000528563 MGEA5O60502 916 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 MUTP22033 750 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 DSC3Q14574 896 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 EMC2Q15006 297 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 DTHD1Q6ZMT9 781 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 ZNF410Q86VK4 478 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 RHPN2Q8IUC4 686 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 KSR1Q8IVT5 923 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 NLRP7Q8WX94 980 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 FDXACB1Q9BRP7 624 aaPredicted RBP18.77■□□□□ 0.6
HIF3A-211ENST00000528563 PRDM12Q9H4Q4 367 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 XPNPEP1Q9NQW7 623 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 RGS18Q9NS28 235 aa18.77■□□□□ 0.6
HIF3A-211ENST00000528563 DBR1Q9UK59 544 aaKnown RBP18.77■□□□□ 0.6
HIF3A-211ENST00000528563 DGAT1O75907 488 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 FAM189BP81408 668 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 ECM1Q16610 540 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 ARL6IP4Q66PJ3 421 aaKnown RBP18.77■□□□□ 0.59
HIF3A-211ENST00000528563 TCP11Q8WWU5 503 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 ADAM2Q99965 735 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 GCOM2Q9BZD3 368 aaPredicted RBP18.77■□□□□ 0.59
HIF3A-211ENST00000528563 RAB34Q9BZG1 259 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 IFT122Q9HBG6 1241 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 STK24Q9Y6E0 443 aa18.77■□□□□ 0.59
HIF3A-211ENST00000528563 LINC01553A4QN01 128 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 ASAP2O43150 1006 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 CSDE1O75534 798 aaKnown RBP18.76■□□□□ 0.59
HIF3A-211ENST00000528563 CCT6AP40227 531 aaKnown RBP18.76■□□□□ 0.59
HIF3A-211ENST00000528563 LAMTOR4Q0VGL1 99 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 HAUS3Q68CZ6 603 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 POTEGQ6S5H5 508 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 SLC24A5Q71RS6 500 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 SPRED2Q7Z698 418 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 PSPC1Q8WXF1 523 aaKnown RBP18.76■□□□□ 0.59
HIF3A-211ENST00000528563 SCLT1Q96NL6 688 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 MTMR6Q9Y217 621 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 COL4A3BPQ9Y5P4 624 aa18.76■□□□□ 0.59
HIF3A-211ENST00000528563 TRANK1O15050 2925 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 C9IYK1 514 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 DGKIO75912 1065 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 CDC25AP30304 524 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 ERVK-21P61565 698 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 NPAS4Q8IUM7 802 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 ZNF689Q96CS4 500 aaPredicted RBP18.75■□□□□ 0.59
HIF3A-211ENST00000528563 YME1L1Q96TA2 773 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 MTRQ99707 1265 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 MMTAG2Q9BU76 263 aaKnown RBP18.75■□□□□ 0.59
HIF3A-211ENST00000528563 INO80BQ9C086 356 aaPredicted RBP18.75■□□□□ 0.59
HIF3A-211ENST00000528563 CERS4Q9HA82 394 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 RC3H2Q9HBD1 1191 aaKnown RBP18.75■□□□□ 0.59
HIF3A-211ENST00000528563 C1orf112Q9NSG2 853 aa18.75■□□□□ 0.59
HIF3A-211ENST00000528563 BMP2KQ9NSY1 1161 aaPredicted RBP18.75■□□□□ 0.59
HIF3A-211ENST00000528563 DENND3A2RUS2 1198 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 PP2D1A8MPX8 630 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 FGFR4P22455 802 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 ARL2P36404 184 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 SARSP49591 514 aaKnown RBP18.74■□□□□ 0.59
HIF3A-211ENST00000528563 RESTQ13127 1097 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 ADGRE1Q14246 886 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 NLRP4Q96MN2 994 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 ATP6V0A4Q9HBG4 840 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 KIAA1024Q9UPX6 916 aa18.74■□□□□ 0.59
HIF3A-211ENST00000528563 ARID2Q68CP9 1835 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 EPOPA6NHQ4 379 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 STX6O43752 255 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 BMP15O95972 392 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 STAG3L1P0CL83 205 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 SRGAP2CP0DJJ0 459 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 MXD4Q14582 209 aaPredicted RBP18.73■□□□□ 0.59
HIF3A-211ENST00000528563 SNX29Q8TEQ0 813 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 ARNTL2Q8WYA1 636 aa18.73■□□□□ 0.59
HIF3A-211ENST00000528563 CCDC43Q96MW1 224 aaKnown RBP18.73■□□□□ 0.59
HIF3A-211ENST00000528563 TGS1Q96RS0 853 aaKnown RBP18.73■□□□□ 0.59
HIF3A-211ENST00000528563 CDH23Q9H251 3354 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 VWA3AA6NCI4 1184 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 RFXAPO00287 272 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 FOSL2P15408 326 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 ZSCAN20P17040 1043 aaPredicted RBP18.72■□□□□ 0.59
HIF3A-211ENST00000528563 POU5F1BQ06416 359 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 SF3A1Q15459 793 aaKnown RBP18.72■□□□□ 0.59
HIF3A-211ENST00000528563 KRT79Q5XKE5 535 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 SRGAP1Q7Z6B7 1085 aa18.72■□□□□ 0.59
HIF3A-211ENST00000528563 GAS2L1Q99501 681 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms